RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 AP5M1Q9H0R1 490 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 JADE2Q9NQC1 790 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 SMC3Q9UQE7 1217 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 KBTBD13C9JR72 458 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 FARP2O94887 1054 aaPredicted RBP22.14■■□□□ 1.13
DDX55-207ENST00000540763 PGK1P00558 417 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 ITGB5P18084 799 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 GJB2P29033 226 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 CIITAP33076 1130 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 MNX1P50219 401 aaPredicted RBP22.14■■□□□ 1.13
DDX55-207ENST00000540763 NONOQ15233 471 aaKnown RBP eCLIP22.14■■□□□ 1.13
DDX55-207ENST00000540763 SAFBQ15424 915 aaKnown RBP eCLIP22.14■■□□□ 1.13
DDX55-207ENST00000540763 CEP55Q53EZ4 464 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 RTEL1Q9NZ71 1219 aa22.14■■□□□ 1.13
DDX55-207ENST00000540763 CCDC194A0A1B0GVG4 234 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 GH1P01241 217 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 C6orf222P0C671 652 aaPredicted RBP22.13■■□□□ 1.13
DDX55-207ENST00000540763 SETQ01105 290 aaPredicted RBP22.13■■□□□ 1.13
DDX55-207ENST00000540763 SEMA3FQ13275 785 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 MTMR1Q13613 665 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 MOXD1Q6UVY6 613 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 DIS3L2Q8IYB7 885 aaKnown RBP22.13■■□□□ 1.13
DDX55-207ENST00000540763 PCSK9Q8NBP7 692 aaKnown RBP22.13■■□□□ 1.13
DDX55-207ENST00000540763 GIMAP8Q8ND71 665 aaPredicted RBP22.13■■□□□ 1.13
DDX55-207ENST00000540763 TBCKQ8TEA7 893 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 TNFRSF25Q93038 417 aa22.13■■□□□ 1.13
DDX55-207ENST00000540763 MOXD2PA6NHM9 499 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 MEIS1O00470 390 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 CTAGE5O15320 804 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 UBA1P22314 1058 aaKnown RBP22.12■■□□□ 1.13
DDX55-207ENST00000540763 CPT1AP50416 773 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 ARHGAP1Q07960 439 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 NEDD9Q14511 834 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 LY6KQ17RY6 165 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 BRDTQ58F21 947 aaPredicted RBP22.12■■□□□ 1.13
DDX55-207ENST00000540763 CCSAPQ6IQ19 270 aaPredicted RBP22.12■■□□□ 1.13
DDX55-207ENST00000540763 OR6J1Q8NGC5 347 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 OXER1Q8TDS5 423 aa22.12■■□□□ 1.13
DDX55-207ENST00000540763 IGLV3-22A0A075B6J6 115 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 DYNC1LI2O43237 492 aaPredicted RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 ZEB2O60315 1214 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 COL6A1P12109 1028 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 ZNF76P36508 570 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 LAMC2Q13753 1193 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 FSCN1Q16658 493 aaKnown RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 GJC2Q5T442 439 aaPredicted RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 NECAB2Q7Z6G3 386 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 ZFP91Q96JP5 570 aaPredicted RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 NAP1L4Q99733 375 aaKnown RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 FOXP1Q9H334 677 aaPredicted RBP22.11■■□□□ 1.13
DDX55-207ENST00000540763 PHF24Q9UPV7 400 aa22.11■■□□□ 1.13
DDX55-207ENST00000540763 A6NJR5 290 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 NR5A1Q13285 461 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 GNASQ5JWF2 1037 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 CELF3Q5SZQ8 465 aaKnown RBP22.1■■□□□ 1.13
DDX55-207ENST00000540763 NEK8Q86SG6 692 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 COPS5Q92905 334 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 ALPK3Q96L96 1907 aa22.1■■□□□ 1.13
DDX55-207ENST00000540763 SCN10AQ9Y5Y9 1956 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 CYP3A7-CYP3A51PA0A087WV96 503 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 MYADML2A6NDP7 307 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 BTBD18B2RXH4 712 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 FAM86B1E9PN63 330 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 GGPS1O95749 300 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 FAM86B2P0C5J1 330 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 GCFC2P16383 781 aaKnown RBP22.09■■□□□ 1.13
DDX55-207ENST00000540763 KCNA2P16389 499 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 CYP3A7P24462 503 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 FOSBP53539 338 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 SP2Q02086 613 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 MYSM1Q5VVJ2 828 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 METTL7BQ6UX53 244 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 PIK3AP1Q6ZUJ8 805 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 DHX37Q8IY37 1157 aaKnown RBP22.09■■□□□ 1.13
DDX55-207ENST00000540763 PPTC7Q8NI37 304 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 MBOAT7Q96N66 472 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 C11orf49Q9H6J7 331 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 KCNH7Q9NS40 1196 aa22.09■■□□□ 1.13
DDX55-207ENST00000540763 NFASCO94856 1347 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 EDIL3O43854 480 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 KPNA6O60684 536 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 CABYRO75952 493 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 HOXD8P13378 290 aaPredicted RBP22.08■■□□□ 1.13
DDX55-207ENST00000540763 PDCP20941 246 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 GUCY1B3Q02153 619 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 KCNA10Q16322 511 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 INF2Q27J81 1249 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 PLA2G4DQ86XP0 818 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 CYP2W1Q8TAV3 490 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 DIS3LQ8TF46 1054 aaKnown RBP22.08■■□□□ 1.13
DDX55-207ENST00000540763 PAWRQ96IZ0 340 aaKnown RBP22.08■■□□□ 1.13
DDX55-207ENST00000540763 POLR3EQ9NVU0 708 aa22.08■■□□□ 1.13
DDX55-207ENST00000540763 TRIOBPQ9H2D6 2365 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 ASGR1P07306 291 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 ACLYP53396 1101 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 Q4G0T1 1027 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 PPP4R3AQ6IN85 833 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 LENG9Q96B70 501 aa22.07■■□□□ 1.12
DDX55-207ENST00000540763 MLXIPQ9HAP2 919 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms