RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 NR2F2P24468 414 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 MAGOHP61326 146 aaKnown RBP14.21□□□□□ -0.13
MSH6-210ENST00000540021 CYP4A11Q02928 519 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 FAM133BQ5BKY9 247 aaKnown RBP14.21□□□□□ -0.13
MSH6-210ENST00000540021 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 MAGOHBQ96A72 148 aaKnown RBP14.21□□□□□ -0.13
MSH6-210ENST00000540021 ATP6V1G3Q96LB4 118 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.13
MSH6-210ENST00000540021 LRRC10BA6NIK2 292 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 MEIS1O00470 390 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 CHMP2AO43633 222 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 NEBLO76041 1014 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 PLTPP55058 493 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 IRF2BP1Q8IU81 584 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 CELF1Q92879 486 aaKnown RBP14.21□□□□□ -0.13
MSH6-210ENST00000540021 AK8Q96MA6 479 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 CUEDC2Q9H467 287 aa14.21□□□□□ -0.13
MSH6-210ENST00000540021 TDP2O95551 362 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 SERPING1P05155 500 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 KLRC1P26715 233 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 HAUS3Q68CZ6 603 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 CREG2Q8IUH2 290 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 MTMR8Q96EF0 704 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 AMACRQ9UHK6 382 aa14.21□□□□□ -0.14
MSH6-210ENST00000540021 GCNT3O95395 438 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 MYL1P05976 194 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 H2AFZP0C0S5 128 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 SLC16A2P36021 539 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 GJC1P36383 396 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.148e-6■■■■■ 52.4
MSH6-210ENST00000540021 H2AFVQ71UI9 128 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 MAEAQ7L5Y9 396 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 MMGT1Q8N4V1 131 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 TAOK3Q9H2K8 898 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 EPHB6O15197 1021 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 CLIC2O15247 247 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 RGS16O15492 202 aaPredicted RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 GSTO1P78417 241 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 SPATS2Q86XZ4 545 aaKnown RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 BANK1Q8NDB2 785 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 WHAMMQ8TF30 809 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 MRRFQ96E11 262 aaKnown RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 HMGB1P1B2RPK0 211 aaPredicted RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 PGRMC1O00264 195 aaKnown RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 RAD51CO43502 376 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
MSH6-210ENST00000540021 IQCDQ96DY2 449 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 NUCKS1Q9H1E3 243 aaKnown RBP14.2□□□□□ -0.14
MSH6-210ENST00000540021 AMFRQ9UKV5 643 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 PLAGL2Q9UPG8 496 aa14.2□□□□□ -0.14
MSH6-210ENST00000540021 A0A1B0GUA9 196 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 MYMKA6NI61 221 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 DAPK3O43293 454 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 PDE6BP35913 854 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 DENND2CQ68D51 928 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 RSRC1Q96IZ7 334 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 DUSP9Q99956 384 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 MTA3Q9BTC8 594 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 EPN3Q9H201 632 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 CXorf56Q9H5V9 222 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 DDX25Q9UHL0 483 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 GGT7Q9UJ14 662 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 RASAL2Q9UJF2 1139 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 FBXL5Q9UKA1 691 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 LAD1O00515 517 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 TNFAIP3P21580 790 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 MDH1P40925 334 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 EXOC3L4Q17RC7 722 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 VGLL2Q8N8G2 317 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 SH3RF3Q8TEJ3 882 aaPredicted RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 KLC4Q9NSK0 619 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 CTTNBP2NLQ9P2B4 639 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 GFPT2O94808 682 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 EPB41P11171 864 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 PCP11498 1178 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 ACTN1P12814 892 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 VPS41P49754 854 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 MRPL12P52815 198 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 SEPT7Q16181 437 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 TTMPQ5BVD1 217 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 FAM84BQ96KN1 310 aaPredicted RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 CCSER1Q9C0I3 900 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 NSRP1Q9H0G5 558 aaKnown RBP14.19□□□□□ -0.14
MSH6-210ENST00000540021 VEZTQ9HBM0 779 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 PTPN22Q9Y2R2 807 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 SPATA31A3Q5VYP0 1347 aa14.19□□□□□ -0.14
MSH6-210ENST00000540021 GMNCA6NCL1 334 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 SPDYE3A6NKU9 549 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 E9PMD0 336 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 ADAMTS3O15072 1205 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 CHUKO15111 745 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 KLRK1P26718 216 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 PEX19P40855 299 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms