RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ICAM1P05362 532 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 IQCF3P0C7M6 154 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 XRCC6P12956 609 aaKnown RBP eCLIP8.72□□□□□ -1.01
GNE-205ENST00000539815 RASA1P20936 1047 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 RNASELQ05823 741 aaKnown RBP8.72□□□□□ -1.01
GNE-205ENST00000539815 KIAA1841Q6NSI8 718 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 CATIPQ7Z7H3 387 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 FLCNQ8NFG4 579 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 PPP1R13LQ8WUF5 828 aa8.72□□□□□ -1.01
GNE-205ENST00000539815 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
GNE-205ENST00000539815 PRR33A8MZF0 331 aa8.71□□□□□ -1.01
GNE-205ENST00000539815 NR1I2O75469 434 aa8.71□□□□□ -1.01
GNE-205ENST00000539815 MAMDC4Q6UXC1 1216 aa8.71□□□□□ -1.01
GNE-205ENST00000539815 CD207Q9UJ71 328 aa8.71□□□□□ -1.01
GNE-205ENST00000539815 RIPK3Q9Y572 518 aa8.71□□□□□ -1.01
GNE-205ENST00000539815 FSD2A1L4K1 749 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 RPLP2P05387 115 aaKnown RBP8.71□□□□□ -1.02
GNE-205ENST00000539815 CTDSPL2Q05D32 466 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.02
GNE-205ENST00000539815 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
GNE-205ENST00000539815 DNERQ8NFT8 737 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 LMCD1Q9NZU5 365 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 ABCB11O95342 1321 aa8.71□□□□□ -1.02
GNE-205ENST00000539815 IFIT3O14879 490 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 KLHDC9Q8NEP7 349 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 KRT23Q9C075 422 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 YBX2Q9Y2T7 364 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 PCDHB7Q9Y5E2 793 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 TMOD1P28289 359 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 ADGRE1Q14246 886 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 SBK1Q52WX2 424 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 GTPBP4Q9BZE4 634 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 HDAC6Q9UBN7 1215 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 UMODL1Q5DID0 1318 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 CCDC69A6NI79 296 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 PPFIA4O75335 1185 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 EIF3JO75822 258 aaKnown RBP8.7□□□□□ -1.02
GNE-205ENST00000539815 NR3C2P08235 984 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 GOLGA8HP0CJ92 632 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 METTL13Q8N6R0 699 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 TMEM169Q96HH4 297 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 CYP39A1Q9NYL5 469 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 MTCH2Q9Y6C9 303 aa8.7□□□□□ -1.02
GNE-205ENST00000539815 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 GJB5O95377 273 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 GHRP10912 638 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 GNAQP50148 359 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 GIMAP8Q8ND71 665 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 NEK1Q96PY6 1258 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 SDF4Q9BRK5 362 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 APOL5Q9BWW9 433 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 PUS7LQ9H0K6 701 aaKnown RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 MARK3P27448 753 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 KRT40Q6A162 431 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 METTL16Q86W50 562 aaKnown RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 FAM133AQ8N9E0 248 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 EVI5LQ96CN4 794 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 NCDNQ9UBB6 729 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 DBR1Q9UK59 544 aaKnown RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 COL2A1P02458 1487 aaPredicted RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 LAMB2P55268 1798 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 H3BRB1 525 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 RB1P06400 928 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 CBX1P83916 185 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 TAP1Q03518 808 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 GABPAQ06546 454 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 ASPRV1Q53RT3 343 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 APBB2Q92870 758 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
GNE-205ENST00000539815 INCENPQ9NQS7 918 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 MYH3P11055 1940 aa8.69□□□□□ -1.02
GNE-205ENST00000539815 MX1P20591 662 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 FOXK2Q01167 660 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 POLA2Q14181 598 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 GMCL1P1Q8NEA9 526 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 COPS5Q92905 334 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 NKD2Q969F2 451 aaPredicted RBP8.68□□□□□ -1.02
GNE-205ENST00000539815 MRPL38Q96DV4 380 aaKnown RBP8.68□□□□□ -1.02
GNE-205ENST00000539815 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 IWS1Q96ST2 819 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 ATP6V0A4Q9HBG4 840 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 GEMIN8Q9NWZ8 242 aaKnown RBP8.68□□□□□ -1.02
GNE-205ENST00000539815 RTEL1Q9NZ71 1219 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 SYNPO2Q9UMS6 1093 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 ST18O60284 1047 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 PAK2Q13177 524 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 TCEAL5Q5H9L2 206 aa8.68□□□□□ -1.02
GNE-205ENST00000539815 ATAT1Q5SQI0 421 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms