RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 HAS3O00219 553 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 PARP1P09874 1014 aaKnown RBP15.19■□□□□ 0.02
COPB1-209ENST00000533096 ALADP13716 330 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
COPB1-209ENST00000533096 HSDL1Q3SXM5 330 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 TRAF7Q6Q0C0 670 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 ATP6V0A1Q93050 837 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 MRPL38Q96DV4 380 aaKnown RBP15.19■□□□□ 0.02
COPB1-209ENST00000533096 ZSCAN10Q96SZ4 725 aaPredicted RBP15.19■□□□□ 0.02
COPB1-209ENST00000533096 YME1L1Q96TA2 773 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
COPB1-209ENST00000533096 CCDC171Q6TFL3 1326 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 C17orf102A2RUQ5 167 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 PRR33A8MZF0 331 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 GGPS1O95749 300 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 F2P00734 622 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 CTSHP09668 335 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
COPB1-209ENST00000533096 SP2Q02086 613 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 RBL2Q08999 1139 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 CCDC178Q5BJE1 867 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 CELF3Q5SZQ8 465 aaKnown RBP15.18■□□□□ 0.02
COPB1-209ENST00000533096 MYSM1Q5VVJ2 828 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 BCAS3Q9H6U6 928 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 CHD7Q9P2D1 2997 aa15.18■□□□□ 0.02
COPB1-209ENST00000533096 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 MYH7P12883 1935 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 GBF1Q92538 1859 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 CSPG5O95196 566 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 SDSP20132 328 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
COPB1-209ENST00000533096 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 STAG2Q8N3U4 1231 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 SEPT8Q92599 483 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
COPB1-209ENST00000533096 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 CLDND1Q9NY35 253 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 PCDHA1Q9Y5I3 950 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 SCN5AQ14524 2016 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 LRRC37A2A6NM11 1700 aa15.17■□□□□ 0.02
COPB1-209ENST00000533096 H3BRB1 525 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 TREHO43280 583 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 RGS20O76081 388 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
COPB1-209ENST00000533096 CLUL1Q15846 466 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
COPB1-209ENST00000533096 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 VSIG10LQ86VR7 867 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
COPB1-209ENST00000533096 GPKOWQ92917 476 aaPredicted RBP eCLIP15.16■□□□□ 0.024e-7■□□□□ 11.1
COPB1-209ENST00000533096 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 C16orf70Q9BSU1 422 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 RNPEPQ9H4A4 650 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 IGFLR1Q9H665 355 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 TUT1Q9H6E5 874 aaKnown RBP15.16■□□□□ 0.02
COPB1-209ENST00000533096 SETD4Q9NVD3 440 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
COPB1-209ENST00000533096 KLRF2D3W0D1 207 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 H3BNC9 293 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 SMIM10L2AP0DMW4 78 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 SMIM10L2BP0DMW5 78 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 HTRA4P83105 476 aaPredicted RBP15.15■□□□□ 0.02
COPB1-209ENST00000533096 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
COPB1-209ENST00000533096 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 ANKS1AQ92625 1134 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 TOP1MTQ969P6 601 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 IFIH1Q9BYX4 1025 aaKnown RBP15.15■□□□□ 0.02
COPB1-209ENST00000533096 MAF1Q9H063 256 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 BDP1A6H8Y1 2624 aa15.15■□□□□ 0.02
COPB1-209ENST00000533096 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
COPB1-209ENST00000533096 DCXO43602 365 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 HSD17B4P51659 736 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 PGM5Q15124 567 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 SAMD11Q96NU1 681 aa15.14■□□□□ 0.01
COPB1-209ENST00000533096 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 OPLAHO14841 1288 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 UBA1P22314 1058 aaKnown RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 CCND2P30279 289 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 MRE11P49959 708 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms