RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
PRKDC-204ENST00000521331 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 LAMA4Q16363 1823 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 LCHNA4D1U4 455 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 LPXNO60711 386 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 RGS20O76081 388 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 TGFB3P10600 412 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 MYCLP12524 364 aaPredicted RBP17.29■□□□□ 0.36
PRKDC-204ENST00000521331 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
PRKDC-204ENST00000521331 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
PRKDC-204ENST00000521331 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
PRKDC-204ENST00000521331 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-204ENST00000521331 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-204ENST00000521331 GGPS1O95749 300 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 IGHDP01880 384 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 CCND2P30279 289 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 TRDNQ13061 729 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 PGM5Q15124 567 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 SEC23AQ15436 765 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 ZNF618Q5T7W0 954 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 TRAF7Q6Q0C0 670 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
PRKDC-204ENST00000521331 TMCO2Q7Z6W1 182 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-204ENST00000521331 TGS1Q96RS0 853 aaKnown RBP17.28■□□□□ 0.36
PRKDC-204ENST00000521331 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
PRKDC-204ENST00000521331 LGR5O75473 907 aa17.27■□□□□ 0.36
PRKDC-204ENST00000521331 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
PRKDC-204ENST00000521331 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
PRKDC-204ENST00000521331 ERVK-21P61565 698 aa17.27■□□□□ 0.36
PRKDC-204ENST00000521331 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.36
PRKDC-204ENST00000521331 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
PRKDC-204ENST00000521331 LINC01553A4QN01 128 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
PRKDC-204ENST00000521331 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
PRKDC-204ENST00000521331 MBTPS1Q14703 1052 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 TCTN1Q2MV58 587 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 SERINC5Q86VE9 423 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 WNT8BQ93098 351 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 C16orf70Q9BSU1 422 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
PRKDC-204ENST00000521331 C17orf102A2RUQ5 167 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 RSPH10B2B2RC85 870 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 AMHP03971 560 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 RSPH10BP0C881 870 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 THPOP40225 353 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 SP2Q02086 613 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 GRM4Q14833 912 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 IL31RAQ8NI17 732 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 RIOX1Q9H6W3 641 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 SUGCTQ9HAC7 445 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 RAPGEFL1Q9UHV5 662 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 MTUS1Q9ULD2 1270 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 INSL6Q9Y581 213 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
PRKDC-204ENST00000521331 ERICH2A1L162 156 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 SORBS3O60504 671 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 STAM2O75886 525 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 HIC1Q14526 733 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 GNPTABQ3T906 1256 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 FCHSD1Q86WN1 690 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 PIGSQ96S52 555 aa17.24■□□□□ 0.35
PRKDC-204ENST00000521331 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PRKDC-204ENST00000521331 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
PRKDC-204ENST00000521331 PNMA6FA0A0J9YX94 578 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 H3BRB1 525 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
PRKDC-204ENST00000521331 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
PRKDC-204ENST00000521331 CAND2O75155 1236 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 HOXC8P31273 242 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
PRKDC-204ENST00000521331 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 DBF4BQ8NFT6 615 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 USP26Q9BXU7 913 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 IL25Q9H293 177 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 TUT1Q9H6E5 874 aaKnown RBP17.23■□□□□ 0.35
PRKDC-204ENST00000521331 REV3LO60673 3130 aa17.23■□□□□ 0.35
PRKDC-204ENST00000521331 LGALS2P05162 132 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 GNAT1P11488 350 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 ICAM3P32942 547 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 PLA2G5P39877 138 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 HTRA4P83105 476 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 NEDD9Q14511 834 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 METTL7BQ6UX53 244 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 MYOCDQ8IZQ8 938 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 FBXO22Q8NEZ5 403 aa17.22■□□□□ 0.35
PRKDC-204ENST00000521331 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms