RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 SUSD5O60279 629 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 FSHBP01225 129 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 LRG1P02750 347 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 ATF4P18848 351 aaPredicted RBP4□□□□□ -1.77
SNORA40.14-201ENST00000516543 HOXC12P31275 282 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 IL13P35225 146 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 NKX3-2P78367 333 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 PRAMEF18Q5VWM3 479 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 E4F1Q66K89 784 aaPredicted RBP4□□□□□ -1.77
SNORA40.14-201ENST00000516543 TEPPQ6URK8 271 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 PPIL6Q8IXY8 311 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 Q8N1X5 172 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 TMEM145Q8NBT3 493 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 SLC16A11Q8NCK7 471 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 C1orf159Q96HA4 380 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 CHAMP1Q96JM3 812 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 LCORQ96JN0 433 aaPredicted RBP4□□□□□ -1.77
SNORA40.14-201ENST00000516543 YIPF4Q9BSR8 244 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 TGIF2Q9GZN2 237 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 SCAND2PQ9GZW5 306 aaPredicted RBP4□□□□□ -1.77
SNORA40.14-201ENST00000516543 PCDH18Q9HCL0 1135 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 DTLQ9NZJ0 730 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 LRP2BPQ9P2M1 347 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 PPARGC1AQ9UBK2 798 aaKnown RBP4□□□□□ -1.77
SNORA40.14-201ENST00000516543 CROTQ9UKG9 612 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 ZNF652Q9Y2D9 606 aa4□□□□□ -1.77
SNORA40.14-201ENST00000516543 ZBTB7CA1YPR0 619 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 C1QTNF3-AMACRE9PGA6 284 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 HGSO14964 777 aaPredicted RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 GPR42O15529 346 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 LAMTOR5O43504 91 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 MSCO60682 206 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 TADA3O75528 432 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 CYP1A1P04798 512 aaPredicted RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 SCG5P05408 212 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 NAT2P11245 290 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 ETFBP38117 255 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 KCNJ6P48051 423 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 GFRA1P56159 465 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 STEAP3Q658P3 488 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 IQCEQ6IPM2 695 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 BORAQ6PGQ7 559 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 GLB1LQ6UWU2 654 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 TMC5Q6UXY8 1006 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 RBM12BQ8IXT5 1001 aaKnown RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 TTC9BQ8N6N2 239 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 CHST13Q8NET6 341 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 IGDCC4Q8TDY8 1250 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 SH3RF3Q8TEJ3 882 aaPredicted RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 TOE1Q96GM8 510 aaKnown RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 YTHDC1Q96MU7 727 aaKnown RBP3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 CDIP1Q9H305 208 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 CLDND1Q9NY35 253 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 ACTR10Q9NZ32 417 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 STRIP2Q9ULQ0 834 aa3.99□□□□□ -1.77
SNORA40.14-201ENST00000516543 MYO1BO43795 1136 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 DDAH1O94760 285 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 CAPNS1P04632 268 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 GTF2A2P52657 109 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 KCNAB2Q13303 367 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 LSAMPQ13449 338 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 FAM124AQ86V42 546 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 PROSER1Q86XN7 944 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 DVL3Q92997 716 aaPredicted RBP3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 JAM3Q9BX67 310 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 L2HGDHQ9H9P8 463 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 CD248Q9HCU0 757 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 COA3Q9Y2R0 106 aaPredicted RBP3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 PCDHB4Q9Y5E5 795 aa3.98□□□□□ -1.77
SNORA40.14-201ENST00000516543 C9orf118A6NHY6 69 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 H7BY64 318 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 B4GALT4O60513 344 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 COL6A1P12109 1028 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 LTBRP36941 435 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 GRIN1Q05586 938 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 TESK1Q15569 626 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 EMC4Q5J8M3 183 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 SLC35F1Q5T1Q4 408 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 ACBD5Q5T8D3 534 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 ZNF585AQ6P3V2 769 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 PALM2Q8IXS6 379 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 TMEM168Q9H0V1 697 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 CCSER2Q9H7U1 834 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 MYOTQ9UBF9 498 aa3.97□□□□□ -1.77
SNORA40.14-201ENST00000516543 NPEPPSL1A6NEC2 478 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 SLC27A2O14975 620 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 CPP00450 1065 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 LTFP02788 710 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 C6P13671 934 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 PKN3Q6P5Z2 889 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 TRMT10BQ6PF06 316 aaKnown RBP3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 KBTBD2Q8IY47 623 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 NUDT10Q8NFP7 164 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 PIP4K2CQ8TBX8 421 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 CLEC4DQ8WXI8 215 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 NUDT11Q96G61 164 aa3.96□□□□□ -1.78
SNORA40.14-201ENST00000516543 CLIC6Q96NY7 704 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms