RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 DISP2A7MBM2 1401 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 GLI3P10071 1580 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 ITGB4P16144 1822 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 KDM6AO15550 1401 aaPredicted RBP8.92□□□□□ -0.98
RFC1-213ENST00000512275 AFF2P51816 1311 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 SPATA31A1Q5TZJ5 1347 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 A0A087WZG4 1122 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 TBX1O43435 398 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 PPM1BO75688 479 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 MAP7Q14244 749 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 CBX2Q14781 532 aaPredicted RBP8.92□□□□□ -0.98
RFC1-213ENST00000512275 NBPF9Q3BBW0 867 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 RPUSD2Q8IZ73 545 aaKnown RBP8.92□□□□□ -0.98
RFC1-213ENST00000512275 ARMC10Q8N2F6 343 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 ARHGEF39Q8N4T4 335 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 MFSD3Q96ES6 412 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 CWC22Q9HCG8 908 aaKnown RBP8.92□□□□□ -0.98
RFC1-213ENST00000512275 C1GALT1Q9NS00 363 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 EMC9Q9Y3B6 208 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
RFC1-213ENST00000512275 THSD7AQ9UPZ6 1657 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 IL16Q14005 1332 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 SPATA31A5Q5VU36 1347 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 SPATA31A7Q8IWB4 1347 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 TRBV23-1A0A0A0MS06 115 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 PLD2O14939 933 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 EOMESO95936 686 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 GRIA2P42262 883 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 ANAPC15P60006 121 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
RFC1-213ENST00000512275 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
RFC1-213ENST00000512275 KRT26Q7Z3Y9 468 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 SCUBE1Q8IWY4 988 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 NIM1KQ8IY84 436 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 TRMT2AQ8IZ69 625 aaKnown RBP8.91□□□□□ -0.98
RFC1-213ENST00000512275 OSBP2Q969R2 916 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 MYH16Q9H6N6 1097 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 PRR13Q9NZ81 148 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 LRP2BPQ9P2M1 347 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 FHOD1Q9Y613 1164 aa8.91□□□□□ -0.98
RFC1-213ENST00000512275 TNS2Q63HR2 1409 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 PCDH11XQ9BZA7 1347 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 PCDH11YQ9BZA8 1340 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 CYP27B1O15528 508 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 HTATSF1O43719 755 aaKnown RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 PABPC1P11940 636 aaKnown RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 ITGA4P13612 1032 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 PHKG2P15735 406 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 ZNF445P59923 1031 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 GNAI1P63096 354 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 CDK5R2Q13319 367 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 C21orf62-AS1Q17RA5 79 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 FNDC3BQ53EP0 1204 aaKnown RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 ADAT2Q7Z6V5 191 aaKnown RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 IL17REQ8NFR9 667 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 FBXO41Q8TF61 875 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 CDC6Q99741 560 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 CGGBP1Q9UFW8 167 aaPredicted RBP8.9□□□□□ -0.98
RFC1-213ENST00000512275 PCDHB12Q9Y5F1 795 aa8.9□□□□□ -0.98
RFC1-213ENST00000512275 MRC1P22897 1456 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 BRWD3Q6RI45 1802 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 CEMIPQ8WUJ3 1361 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 C5P01031 1676 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 DNAJC25-GNG10A0A024R161 153 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 RNMTO43148 476 aaKnown RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 RAB11FIP3O75154 756 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 BMP3P12645 472 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 EXOSC9Q06265 439 aaKnown RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 VPS72Q15906 364 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 THNSL2Q86YJ6 484 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 FAM20CQ8IXL6 584 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 SYTL5Q8TDW5 730 aaPredicted RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 UTP4Q969X6 686 aaKnown RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 PPP1R14AQ96A00 147 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 TP53INP1Q96A56 240 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 SSBP4Q9BWG4 385 aaPredicted RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 MRPL4Q9BYD3 311 aaKnown RBP8.89□□□□□ -0.99
RFC1-213ENST00000512275 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 SUGT1Q9Y2Z0 365 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 PAPPAQ13219 1627 aa8.89□□□□□ -0.99
RFC1-213ENST00000512275 ATRNO75882 1429 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 CNTNAP4Q9C0A0 1308 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 A0A087X0B3 334 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 RBAK-RBAKDNI3L0D1 243 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 ZNF853P0CG23 659 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 SUMO1P63165 101 aaKnown RBP8.88□□□□□ -0.99
RFC1-213ENST00000512275 TEFQ10587 303 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 SNW1Q13573 536 aaKnown RBP8.88□□□□□ -0.99
RFC1-213ENST00000512275 POMZP3Q6PJE2 187 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms