RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
PDLIM1P4-201ENST00000504327 C22orf46C9J442 243 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ASGR2P07307 311 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ATF2P15336 505 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 HSD3B2P26439 372 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 BCL6P41182 706 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 AFF3P51826 1226 aaKnown RBP5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TARBP2Q15633 366 aaKnown RBP5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 VMACQ2NL98 169 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 SLC35F1Q5T1Q4 408 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TCERG1LQ5VWI1 586 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 IQCEQ6IPM2 695 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 NLGN1Q8N2Q7 840 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 RCBTB1Q8NDN9 531 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 OSBPL2Q9H1P3 480 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 TIMM13Q9Y5L4 95 aaPredicted RBP5.65□□□□□ -1.5
PDLIM1P4-201ENST00000504327 ADAMTS20P59510 1910 aa5.65□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ABCA5Q8WWZ7 1642 aa5.65□□□□□ -1.51
PDLIM1P4-201ENST00000504327 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MYO1BO43795 1136 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 DLX3O60479 287 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PARNO95453 639 aaKnown RBP5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 LTBRP36941 435 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MAP4K2Q12851 820 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TESK1Q15569 626 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 DCP2Q8IU60 420 aaKnown RBP5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ST13P5Q8NFI4 369 aaPredicted RBP5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 KCTD13Q8WZ19 329 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MSRB2Q9Y3D2 182 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PCDHA2Q9Y5H9 948 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
PDLIM1P4-201ENST00000504327 U2SURPO15042 1029 aaKnown RBP5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 HSP90AA2PQ14568 343 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 YOD1Q5VVQ6 348 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CEP68Q76N32 757 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 Q8N1Y9 231 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SGSM3Q96HU1 749 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 RNF38Q9H0F5 515 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CHPF2Q9P2E5 772 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FAN1Q9Y2M0 1017 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 COL4A3BPQ9Y5P4 624 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 GRIN2BQ13224 1484 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SNAPC4Q5SXM2 1469 aa5.63□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CCDC194A0A1B0GVG4 234 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 IQCA1LA6NCM1 817 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SGSM2O43147 1006 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PRODHO43272 600 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TRIM13O60858 407 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PEX14O75381 377 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 EIF3JO75822 258 aaKnown RBP5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MAP4K4O95819 1239 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NCAM1P13591 858 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 BMP7P18075 431 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 GTF2A2P52657 109 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FOXO4P98177 505 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SLC9A5Q14940 896 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 USP53Q70EK8 1073 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CCAR1Q8IX12 1150 aaKnown RBP5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TRMT2BQ96GJ1 504 aaKnown RBP5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 AP5M1Q9H0R1 490 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 X6R8D5 127 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PBRM1Q86U86 1689 aa5.62□□□□□ -1.51
PDLIM1P4-201ENST00000504327 BLACEA4D250 179 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CHD1O14646 1710 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PDPK1O15530 556 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MSCO60682 206 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ZBTB7AO95365 584 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 INHBBP09529 407 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 BMS1Q14692 1282 aaKnown RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 HSP90AB4PQ58FF6 505 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MROH9Q5TGP6 573 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 JAZF1Q86VZ6 243 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 RIOX2Q8IUF8 465 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SMC5Q8IY18 1101 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SMARCC2Q8TAQ2 1214 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SEC14L1Q92503 715 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 OSBP2Q969R2 916 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MRFAP1L1Q96HT8 127 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MAGI1Q96QZ7 1491 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PPARGC1AQ9UBK2 798 aaKnown RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PFDN2Q9UHV9 154 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PALD1Q9ULE6 856 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 COA3Q9Y2R0 106 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NPFFR2Q9Y5X5 522 aa5.61□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PMF1-BGLAPU3KQ54 211 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms