RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 FAM47CQ5HY64 1035 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 GIMAP6Q6P9H5 292 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 SLC30A10Q6XR72 485 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 FAM160B2Q86V87 743 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 RPUSD2Q8IZ73 545 aaKnown RBP8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 IFNL3Q8IZI9 196 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 OR6J1Q8NGC5 347 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 NEDD1Q8NHV4 660 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 GDPD5Q8WTR4 605 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 STAG1Q8WVM7 1258 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 COPS5Q92905 334 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 CCPG1Q9ULG6 757 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 PRR12Q9ULL5 1215 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 DDX19BQ9UMR2 479 aa8.22□□□□□ -1.09
CHCHD3-206ENST00000496427 KAT6AQ92794 2004 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 LCHNA4D1U4 455 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 NFIBO00712 420 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 SLC16A2P36021 539 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 PURAQ00577 322 aaKnown RBP8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 PPARAQ07869 468 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 GRB10Q13322 594 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 CCDC96Q2M329 555 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 NBPF20Q3BBV1 942 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 TKFCQ3LXA3 575 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 IQSEC1Q6DN90 963 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 TTBK2Q6IQ55 1244 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 FAM160A2Q8N612 972 aaPredicted RBP8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 CHURC1Q8WUH1 139 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 GMCL1Q96IK5 515 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 WDR11Q9BZH6 1224 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 VTA1Q9NP79 307 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 ECHDC1Q9NTX5 307 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.1
CHCHD3-206ENST00000496427 MUC6Q6W4X9 2439 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 PTPDC1A2A3K4 754 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 PFKMP08237 780 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 FDX1P10109 184 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 CALML3P27482 149 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 PDE4BQ07343 736 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 BAATQ14032 418 aaPredicted RBP8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 AAK1Q2M2I8 961 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 TCTN1Q2MV58 587 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 DUSP28Q4G0W2 176 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 C20orf194Q5TEA3 1177 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 HERC6Q8IVU3 1022 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 MORC4Q8TE76 937 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 SLC9A7Q96T83 725 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 FTOQ9C0B1 505 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 NAPBQ9H115 298 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 CD320Q9NPF0 282 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 ATP13A2Q9NQ11 1180 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 IL17RBQ9NRM6 502 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 MTUS1Q9ULD2 1270 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 SYNPO2Q9UMS6 1093 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 Q9Y3F1 56 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 HCN4Q9Y3Q4 1203 aa8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 FRMPD2Q68DX3 1309 aaPredicted RBP8.2□□□□□ -1.1
CHCHD3-206ENST00000496427 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 FOXP2O15409 715 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 LPXNO60711 386 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 ARIH2O95376 493 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 IQCF3P0C7M6 154 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 ACTN1P12814 892 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 GNAT2P19087 354 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 POU3F3P20264 500 aaPredicted RBP8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 GCGRP47871 477 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 CPT1AP50416 773 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 DEFB103AP81534 67 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 TMEM31Q5JXX7 168 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 RCSD1Q6JBY9 416 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 MTG1Q9BT17 334 aaPredicted RBP8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 COG5Q9UP83 839 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 MYO7AQ13402 2215 aa8.19□□□□□ -1.1
CHCHD3-206ENST00000496427 RBM47A0AV96 593 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 DDX11L8A8MPP1 907 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 RANBP6O60518 1105 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 PLA2G6O60733 806 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 ICAM1P05362 532 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 ZFYP08048 801 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 SUPT20HL2P0C7V6 817 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 MS4A1P11836 297 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 WDR5P61964 334 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 PPP2R5BQ15173 497 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms