RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 BAZ2BQ9UIF8 2168 aaKnown RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 MEIS1O00470 390 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 TBX3O15119 743 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 BAG4O95429 457 aaKnown RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 TGFB3P10600 412 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 CYP2B6P20813 491 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 KRT85P78386 507 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 FGD4Q96M96 766 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 INPP4AQ96PE3 977 aaPredicted RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 PURBQ96QR8 312 aaKnown RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 SCAND2PQ9GZW5 306 aaPredicted RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 ABHD16BQ9H3Z7 469 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 JADE2Q9NQC1 790 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 POLR3EQ9NVU0 708 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 DDX25Q9UHL0 483 aaKnown RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 MORC2Q9Y6X9 1032 aaPredicted RBP14.1□□□□□ -0.15
SNX17-208ENST00000493711 ZNF236Q9UL36 1845 aa14.1□□□□□ -0.15
SNX17-208ENST00000493711 FAM205CA6NFA0 338 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 FIBPO43427 364 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 NEMFO60524 1076 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 ATP2B1P20020 1258 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 TOB1P50616 345 aaPredicted RBP14.09□□□□□ -0.15
SNX17-208ENST00000493711 UBXN2AP68543 259 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
SNX17-208ENST00000493711 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 OTOP1Q7RTM1 612 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 PLA2G4DQ86XP0 818 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 GIMAP8Q8ND71 665 aaPredicted RBP14.09□□□□□ -0.15
SNX17-208ENST00000493711 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 NPLOC4Q8TAT6 608 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.09□□□□□ -0.15
SNX17-208ENST00000493711 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
SNX17-208ENST00000493711 RTEL1Q9NZ71 1219 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 ASTN1O14525 1302 aa14.09□□□□□ -0.15
SNX17-208ENST00000493711 ADCY3O60266 1144 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 MARCH6O60337 910 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 YEATS4O95619 227 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 ICAM3P32942 547 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 MCM7P33993 719 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 NASPP49321 788 aaPredicted RBP14.08□□□□□ -0.16
SNX17-208ENST00000493711 SOX10P56693 466 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 MTMR1Q13613 665 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 PKN2Q16513 984 aaKnown RBP14.08□□□□□ -0.16
SNX17-208ENST00000493711 PRR16Q569H4 304 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 ANO1Q5XXA6 986 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 ARL6IP4Q66PJ3 421 aaKnown RBP14.08□□□□□ -0.16
SNX17-208ENST00000493711 IL31RAQ8NI17 732 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 SCFD2Q8WU76 684 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 GABRQQ9UN88 632 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 TRIM17Q9Y577 477 aa14.08□□□□□ -0.16
SNX17-208ENST00000493711 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
SNX17-208ENST00000493711 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 TDP2O95551 362 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 IGHA2P01877 340 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 HMGCRP04035 888 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 ITGB5P18084 799 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 PRPHP41219 470 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 TTLL4Q14679 1199 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 SLC39A14Q15043 492 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
SNX17-208ENST00000493711 ZNF174Q15697 407 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 CTU1Q7Z7A3 348 aaKnown RBP14.07□□□□□ -0.16
SNX17-208ENST00000493711 KCNG4Q8TDN1 519 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 RIT2Q99578 217 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 SENP7Q9BQF6 1050 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 TCEAL9Q9UHQ7 104 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
SNX17-208ENST00000493711 RBM47A0AV96 593 aaKnown RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 NKRFO15226 690 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX17-208ENST00000493711 SNAI1O95863 264 aaPredicted RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 NCLP19338 710 aaKnown RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 ATP2C1P98194 919 aaPredicted RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 DNM1Q05193 864 aaKnown RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 PTGDRQ13258 359 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 STK38Q15208 465 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 CALCRLQ16602 461 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 IQSEC1Q6DN90 963 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 FAM173BQ6P4H8 233 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 TNPO1Q92973 898 aaKnown RBP14.06□□□□□ -0.16
SNX17-208ENST00000493711 FERMT2Q96AC1 680 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 USP28Q96RU2 1077 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 PTPN22Q9Y2R2 807 aa14.06□□□□□ -0.16
SNX17-208ENST00000493711 IPO5O00410 1097 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms