RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 BRWD1Q9NSI6 2320 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 ICAM3P32942 547 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 MCM5P33992 734 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 ZNF697Q5TEC3 545 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 USP38Q8NB14 1042 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 MYLIPQ8WY64 445 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
SRSF4-204ENST00000489898 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
SRSF4-204ENST00000489898 EVPLQ92817 2033 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 ZEB2O60315 1214 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 CDC45O75419 566 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 CPA1P15085 419 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
SRSF4-204ENST00000489898 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
SRSF4-204ENST00000489898 TMEM199Q8N511 208 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 AGXT2Q9BYV1 514 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 OSBPL7Q9BZF2 842 aa13.68□□□□□ -0.22
SRSF4-204ENST00000489898 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
SRSF4-204ENST00000489898 GGPS1O95749 300 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 CDC27P30260 824 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
SRSF4-204ENST00000489898 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 VTI1AQ96AJ9 217 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
SRSF4-204ENST00000489898 ERICH2A1L162 156 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 SORBS3O60504 671 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 KPNA6O60684 536 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 NBNO60934 754 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 MYCLP12524 364 aaPredicted RBP13.66□□□□□ -0.22
SRSF4-204ENST00000489898 KCNA2P16389 499 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 ITGB5P18084 799 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 HSPA4P34932 840 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 PSEN2P49810 448 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 ADAM17P78536 824 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
SRSF4-204ENST00000489898 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 UBE2SQ16763 222 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
SRSF4-204ENST00000489898 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
SRSF4-204ENST00000489898 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
SRSF4-204ENST00000489898 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.65□□□□□ -0.22
SRSF4-204ENST00000489898 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.65□□□□□ -0.22
SRSF4-204ENST00000489898 ATP9AO75110 1047 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 CXCL10P02778 98 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 LGALS2P05162 132 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 MYOGP15173 224 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 CCND2P30279 289 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
SRSF4-204ENST00000489898 MFSD10Q14728 455 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 DGKDQ16760 1214 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 OTOP2Q7RTS6 562 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 GPR20Q99678 358 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
SRSF4-204ENST00000489898 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
SRSF4-204ENST00000489898 TRIOO75962 3097 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 B4DLN1 442 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 STXBP3O00186 592 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 EDIL3O43854 480 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 KIF5BP33176 963 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
SRSF4-204ENST00000489898 RABGGTBP53611 331 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 KIAA0753Q2KHM9 967 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
SRSF4-204ENST00000489898 ZNF576Q9H609 170 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 UBIAD1Q9Y5Z9 338 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 TTC3P53804 2025 aa13.64□□□□□ -0.23
SRSF4-204ENST00000489898 NCOR1O75376 2440 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 SUPT20HL2P0C7V6 817 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 TGFB3P10600 412 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 CKBP12277 381 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 RCAN1P53805 252 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 NTRK3Q16288 839 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 PTGISQ16647 500 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 FAM47CQ5HY64 1035 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms