RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 TXNRD2Q9NNW7 524 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 ADGRG1Q9Y653 693 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 SOWAHDA6NJG2 315 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 PPP1R11O60927 126 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-215ENST00000488897 TRAPPC10P48553 1259 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 STAT2P52630 851 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 KARSQ15046 597 aaKnown RBP20.49■□□□□ 0.87
COL16A1-215ENST00000488897 CNGA4Q8IV77 575 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 GOLGA1Q92805 767 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 GINM1Q9NU53 330 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 ITIH6Q6UXX5 1313 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 CETPP11597 493 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 PTGDRQ13258 359 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 MTF1Q14872 753 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 CCDC102AQ96A19 550 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 MRPL44Q9H9J2 332 aaKnown RBP20.48■□□□□ 0.87
COL16A1-215ENST00000488897 RAVER2Q9HCJ3 691 aaKnown RBP20.48■□□□□ 0.87
COL16A1-215ENST00000488897 ST7Q9NRC1 585 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 HOMER2Q9NSB8 354 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 MFAP3LO75121 409 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 PLS1Q14651 629 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 Q3C1V9 767 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 TEX35Q5T0J7 233 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 JAKMIP3Q5VZ66 844 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 COA7Q96BR5 231 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 AGTPBP1Q9UPW5 1226 aa20.48■□□□□ 0.87
COL16A1-215ENST00000488897 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
COL16A1-215ENST00000488897 KIF5CO60282 957 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CASP1P29466 404 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 TUBB2AQ13885 445 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 NPY5RQ15761 445 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 RAD9BQ6WBX8 426 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 DCAF4Q8WV16 495 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 TUBB2BQ9BVA1 445 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CCDC66A2RUB6 948 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 SPDYE16A6NNV3 312 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-215ENST00000488897 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CC2D1AQ6P1N0 951 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CPLX3Q8WVH0 158 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 LPAR1Q92633 364 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 CPA4Q9UI42 421 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 RIPK3Q9Y572 518 aa20.47■□□□□ 0.87
COL16A1-215ENST00000488897 WNT7AO00755 349 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-215ENST00000488897 SPAG1Q07617 926 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 IFNL1Q8IU54 200 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 ANKRD13CQ8N6S4 541 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 BTBD7Q9P203 1132 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 LRRC10BA6NIK2 292 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 TRPA1O75762 1119 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 E2F4Q16254 413 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 SMYD4Q8IYR2 804 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-215ENST00000488897 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 SLF1Q9BQI6 1058 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 ARFGAP3Q9NP61 516 aa20.46■□□□□ 0.87
COL16A1-215ENST00000488897 LIMA1Q9UHB6 759 aaKnown RBP20.46■□□□□ 0.87
COL16A1-215ENST00000488897 USP17L15C9J2P7 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L13C9JLJ4 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L11C9JVI0 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L18D6R9N7 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L22D6RA61 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L17D6RBQ6 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L19D6RCP7 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L20D6RJB6 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 FECHP22830 423 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 CASP14P31944 242 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 NLRP5P59047 1200 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 USP17L24Q0WX57 530 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 TYW1BQ6NUM6 668 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 FASTKD5Q7L8L6 764 aaKnown RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 ANKRD20A12PQ8NF67 263 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 LZTFL1Q9NQ48 299 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 RWDD2AQ9UIY3 292 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 CTNND2Q9UQB3 1225 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 SEC31AO94979 1220 aaKnown RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 SCG2P13521 617 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 TXLNAP40222 546 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 TUBB4BP68371 445 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 COG2Q14746 738 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 TMEM132BQ14DG7 1078 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 CDC37Q16543 378 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 ASPRV1Q53RT3 343 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 SMCR8Q8TEV9 937 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-215ENST00000488897 PARD6BQ9BYG5 372 aa20.45■□□□□ 0.86
COL16A1-215ENST00000488897 VWA5AO00534 786 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 KIF5BP33176 963 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 HERVK_113P62684 666 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 QRICH1Q2TAL8 776 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 RRAGBQ5VZM2 374 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 TMTC1Q8IUR5 882 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 CEP112Q8N8E3 955 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 TBC1D5Q92609 795 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 EPC1Q9H2F5 836 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 RMND1Q9NWS8 449 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms