RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IPO7O95373 1038 aaKnown RBP28.99■■■□□ 2.23
HLA-C-208ENST00000487245 CACNB3P54284 484 aa28.99■■■□□ 2.23
HLA-C-208ENST00000487245 DDX12PQ92771 950 aa28.99■■■□□ 2.23
HLA-C-208ENST00000487245 GMCL1Q96IK5 515 aa28.99■■■□□ 2.23
HLA-C-208ENST00000487245 MBOAT7Q96N66 472 aa28.99■■■□□ 2.23
HLA-C-208ENST00000487245 SAR1BQ9Y6B6 198 aa28.99■■■□□ 2.23
HLA-C-208ENST00000487245 POLR3GO15318 223 aaPredicted RBP28.98■■■□□ 2.23
HLA-C-208ENST00000487245 EHHADHQ08426 723 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 GPS2Q13227 327 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 ABCB5Q2M3G0 1257 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 DYMQ7RTS9 669 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 TSG101Q99816 390 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 NUDT12Q9BQG2 462 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 TSGA10Q9BZW7 698 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 ABCB6Q9NP58 842 aa28.98■■■□□ 2.23
HLA-C-208ENST00000487245 COL2A1P02458 1487 aaPredicted RBP28.98■■■□□ 2.23
HLA-C-208ENST00000487245 CKAP4Q07065 602 aaKnown RBP28.97■■■□□ 2.23
HLA-C-208ENST00000487245 VWA3BQ502W6 1294 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 SLFN12Q8IYM2 578 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 ANO3Q9BYT9 981 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 SYNPO2Q9UMS6 1093 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 SIK3Q9Y2K2 1263 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 ZNF646O15015 1829 aaPredicted RBP28.97■■■□□ 2.23
HLA-C-208ENST00000487245 ATRNL1Q5VV63 1379 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 TFRCP02786 760 aaKnown RBP28.97■■■□□ 2.23
HLA-C-208ENST00000487245 KLK7P49862 253 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 VSNL1P62760 191 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 MAN2A1Q16706 1144 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 SIAH1Q8IUQ4 282 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 NOA1Q8NC60 698 aaKnown RBP28.97■■■□□ 2.23
HLA-C-208ENST00000487245 AMNQ9BXJ7 453 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 PSD3Q9NYI0 1048 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 PCDHAC2Q9Y5I4 1007 aa28.97■■■□□ 2.23
HLA-C-208ENST00000487245 SLX4Q8IY92 1834 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 RAD21O60216 631 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 EIF3JO75822 258 aaKnown RBP28.96■■■□□ 2.23
HLA-C-208ENST00000487245 RHOXF2BP0C7M4 288 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 IDEP14735 1019 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 MCM3P25205 808 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 VAV2P52735 878 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 NCAPH2Q6IBW4 605 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 RHOXF2Q9BQY4 288 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 KCNMB3Q9NPA1 279 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 PLAGL2Q9UPG8 496 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 STK24Q9Y6E0 443 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 SCN9AQ15858 1988 aa28.96■■■□□ 2.23
HLA-C-208ENST00000487245 F5H6K3 240 aa28.95■■■□□ 2.23
HLA-C-208ENST00000487245 FOSP01100 380 aaPredicted RBP28.95■■■□□ 2.23
HLA-C-208ENST00000487245 ATP1A1P05023 1023 aaKnown RBP28.95■■■□□ 2.23
HLA-C-208ENST00000487245 USP14P54578 494 aa28.95■■■□□ 2.23
HLA-C-208ENST00000487245 KLRC3Q07444 240 aa28.95■■■□□ 2.23
HLA-C-208ENST00000487245 HPS3Q969F9 1004 aa28.95■■■□□ 2.23
HLA-C-208ENST00000487245 PCMTD1Q96MG8 357 aaPredicted RBP28.95■■■□□ 2.23
HLA-C-208ENST00000487245 EDEM3Q9BZQ6 932 aa28.95■■■□□ 2.23
HLA-C-208ENST00000487245 FAM196BA6NMK8 535 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L15C9J2P7 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L13C9JLJ4 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L11C9JVI0 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L18D6R9N7 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L22D6RA61 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L17D6RBQ6 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L19D6RCP7 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L20D6RJB6 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 SLURP2P0DP57 97 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L24Q0WX57 530 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 USP17L6PQ6QN14 398 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 ARHGAP27Q6ZUM4 889 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 KCNK18Q7Z418 384 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 C7orf43Q8WVR3 580 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 NDST4Q9H3R1 872 aa28.95■■■□□ 2.22
HLA-C-208ENST00000487245 TARSL2A2RTX5 802 aaKnown RBP28.94■■■□□ 2.22
HLA-C-208ENST00000487245 LCA5LO95447 670 aa28.94■■■□□ 2.22
HLA-C-208ENST00000487245 RBM26Q5T8P6 1007 aaKnown RBP28.94■■■□□ 2.22
HLA-C-208ENST00000487245 CCDC84Q86UT8 332 aaPredicted RBP28.94■■■□□ 2.22
HLA-C-208ENST00000487245 TXLNBQ8N3L3 684 aa28.94■■■□□ 2.22
HLA-C-208ENST00000487245 DNAJC19Q96DA6 116 aa28.94■■■□□ 2.22
HLA-C-208ENST00000487245 LACRTQ9GZZ8 138 aa28.94■■■□□ 2.22
HLA-C-208ENST00000487245 RCCD1A6NED2 376 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 H3BQF6 201 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 TBX3O15119 743 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 FBXO11Q86XK2 927 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 TEX2Q8IWB9 1127 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 MYOCDQ8IZQ8 938 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 EXOC4Q96A65 974 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 ECM1Q16610 540 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 SYDE2Q5VT97 1194 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 CCDC65Q8IXS2 484 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 ARFGEF1Q9Y6D6 1849 aa28.93■■■□□ 2.22
HLA-C-208ENST00000487245 MEIS2O14770 477 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 MMP14P50281 582 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 COASYQ13057 564 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 AOC3Q16853 763 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 BTNL9Q6UXG8 535 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 LRRC55Q6ZSA7 311 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 ZCCHC17Q9NP64 241 aaKnown RBP28.92■■■□□ 2.22
HLA-C-208ENST00000487245 PANK4Q9NVE7 773 aa28.92■■■□□ 2.22
HLA-C-208ENST00000487245 NDUFB10O96000 172 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 KIF5AQ12840 1032 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 TRAF1Q13077 416 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 SPA17Q15506 151 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms