RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PIK3CDO00329 1044 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 STAM2O75886 525 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 PLEKHA8P1O95397 391 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
CLDN11-207ENST00000486975 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
CLDN11-207ENST00000486975 CCND2P30279 289 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 KRT32Q14532 448 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
CLDN11-207ENST00000486975 IL31RAQ8NI17 732 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
CLDN11-207ENST00000486975 UMODL1Q5DID0 1318 aa16.64■□□□□ 0.25
CLDN11-207ENST00000486975 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 DGKDQ16760 1214 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 TMTC3Q6ZXV5 915 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 ZNF365Q70YC5 407 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 FANCBQ8NB91 859 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-207ENST00000486975 WNT8AQ9H1J5 351 aa16.63■□□□□ 0.25
CLDN11-207ENST00000486975 F2P00734 622 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 XRRA1Q6P2D8 792 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 TEX2Q8IWB9 1127 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 DHX37Q8IY37 1157 aaKnown RBP16.62■□□□□ 0.25
CLDN11-207ENST00000486975 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 KAT2BQ92831 832 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 KCNB2Q92953 911 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
CLDN11-207ENST00000486975 MTIF3Q9H2K0 278 aaKnown RBP16.62■□□□□ 0.25
CLDN11-207ENST00000486975 MEIS2O14770 477 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 PFKMP08237 780 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
CLDN11-207ENST00000486975 CYP2C9P11712 490 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 RXRAP19793 462 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 UBA1P22314 1058 aaKnown RBP16.61■□□□□ 0.25
CLDN11-207ENST00000486975 ICAM3P32942 547 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 RCAN1P53805 252 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 GNPTABQ3T906 1256 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
CLDN11-207ENST00000486975 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 RPUSD2Q8IZ73 545 aaKnown RBP16.61■□□□□ 0.25
CLDN11-207ENST00000486975 CUL5Q93034 780 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
CLDN11-207ENST00000486975 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
CLDN11-207ENST00000486975 HAS3O00219 553 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 GGPS1O95749 300 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 FGBP02675 491 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 ACRP10323 421 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 RFC2P35250 354 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 CCL23P55773 120 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
CLDN11-207ENST00000486975 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 TTYH1Q9H313 450 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-207ENST00000486975 SEMA6BQ9H3T3 888 aa16.6■□□□□ 0.25
CLDN11-207ENST00000486975 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 FIBPO43427 364 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 DNAJB2P25686 324 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 SP2Q02086 613 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 RBL2Q08999 1139 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
CLDN11-207ENST00000486975 MARVELD3Q96A59 401 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 GTF2IRD1Q9UHL9 959 aa16.59■□□□□ 0.25
CLDN11-207ENST00000486975 ZBTB43O43298 467 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
CLDN11-207ENST00000486975 HSPA4P34932 840 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 PSEN2P49810 448 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 FUT2Q10981 343 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 BFSP2Q13515 415 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 PTGISQ16647 500 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 CCDC155Q8N6L0 562 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 SCLYQ96I15 445 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 CTAGE1Q96RT6 745 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 NOD1Q9Y239 953 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
CLDN11-207ENST00000486975 hCG_1984214I3L0E3 225 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 REC8O95072 547 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms