RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
SCFD1-206ENST00000484733 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
SCFD1-206ENST00000484733 LY9Q9HBG7 655 aa13.26□□□□□ -0.29
SCFD1-206ENST00000484733 GGPS1O95749 300 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 CKBP12277 381 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 UBA1P22314 1058 aaKnown RBP13.25□□□□□ -0.29
SCFD1-206ENST00000484733 CHMP4BP1P59074 171 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 SP2Q02086 613 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 SPATA33Q96N06 139 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 IGFBP4P22692 258 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 KIF5BP33176 963 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 HSDL1Q3SXM5 330 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 TRAF7Q6Q0C0 670 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 ZNF654Q8IZM8 581 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-206ENST00000484733 C16orf70Q9BSU1 422 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 THEGQ9P2T0 379 aa13.25□□□□□ -0.29
SCFD1-206ENST00000484733 PIK3CDO00329 1044 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 EFCAB14O75071 495 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 ZNF286BP0CG31 522 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 HOXC8P31273 242 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 GNAQP50148 359 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 GNPTABQ3T906 1256 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 CTCFLQ8NI51 663 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-206ENST00000484733 TMEM87BQ96K49 555 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 LSG1Q9H089 658 aaKnown RBP13.24□□□□□ -0.29
SCFD1-206ENST00000484733 PRDM6Q9NQX0 595 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 ABHD14A-ACY1A0A1B0GW23 586 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 SPATA31C2B4DYI2 1134 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 NBNO60934 754 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 CA3P07451 260 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 KCNJ6P48051 423 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 WDR5P61964 334 aaKnown RBP13.24□□□□□ -0.29
SCFD1-206ENST00000484733 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
SCFD1-206ENST00000484733 NEDD9Q14511 834 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
SCFD1-206ENST00000484733 MLXIPQ9HAP2 919 aa13.24□□□□□ -0.29
SCFD1-206ENST00000484733 MCM5P33992 734 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 LIFRP42702 1097 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 TAP1Q03518 808 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 ASB2Q96Q27 587 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 BAZ2BQ9UIF8 2168 aaKnown RBP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 SH2B2O14492 632 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 FIBPO43427 364 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 PRC1O43663 620 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 CALM1P0DP23 149 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 CALM2P0DP24 149 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 CALM3P0DP25 149 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 MRPS5P82675 430 aaKnown RBP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 HIC1Q14526 733 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 PCNX4Q63HM2 1172 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
SCFD1-206ENST00000484733 CUL5Q93034 780 aa13.23□□□□□ -0.29
SCFD1-206ENST00000484733 ZNF200P98182 395 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-206ENST00000484733 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 ZNF618Q5T7W0 954 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 WNT8BQ93098 351 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 SENP7Q9BQF6 1050 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 H3BRB1 525 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 MEIS2O14770 477 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 SLC27A2O14975 620 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 CAND2O75155 1236 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 LGALS2P05162 132 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 CCDC85BQ15834 202 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-206ENST00000484733 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
SCFD1-206ENST00000484733 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
SCFD1-206ENST00000484733 CCDC69A6NI79 296 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 TLL1O43897 1013 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 LGR5O75473 907 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 IKBKEQ14164 716 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.29
SCFD1-206ENST00000484733 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
SCFD1-206ENST00000484733 GPR20Q99678 358 aa13.21□□□□□ -0.29
SCFD1-206ENST00000484733 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.29
SCFD1-206ENST00000484733 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.3
SCFD1-206ENST00000484733 ARHGEF15O94989 841 aa13.21□□□□□ -0.3
SCFD1-206ENST00000484733 SMIM10L2AP0DMW4 78 aa13.21□□□□□ -0.3
SCFD1-206ENST00000484733 SMIM10L2BP0DMW5 78 aa13.21□□□□□ -0.3
SCFD1-206ENST00000484733 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.3
SCFD1-206ENST00000484733 MBTPS1Q14703 1052 aa13.21□□□□□ -0.3
SCFD1-206ENST00000484733 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms