RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 LAMA3Q16787 3333 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 LTBP2Q14767 1821 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 UMODL1Q5DID0 1318 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 STXBP3O00186 592 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 KPNA6O60684 536 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 ZNF286BP0CG31 522 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 ACRP10323 421 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 CYP2C9P11712 490 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 CSF2RAP15509 400 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 UBA1P22314 1058 aaKnown RBP9.5□□□□□ -0.89
HDAC6-221ENST00000477561 PDIA3P30101 505 aaKnown RBP9.5□□□□□ -0.89
HDAC6-221ENST00000477561 CCL23P55773 120 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 FPGSQ05932 587 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 TOB2Q14106 344 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-221ENST00000477561 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
HDAC6-221ENST00000477561 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 MFSD5Q6N075 450 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 PHKBQ93100 1093 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 SPATA33Q96N06 139 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 ALG1Q9BT22 464 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 AGXT2Q9BYV1 514 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 MLXIPQ9HAP2 919 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
HDAC6-221ENST00000477561 TMEM260Q9NX78 707 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 FRMPD4Q14CM0 1322 aa9.5□□□□□ -0.89
HDAC6-221ENST00000477561 CCDC196A0A1B0GTZ2 297 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 SPATA31C2B4DYI2 1134 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 RBM25P49756 843 aaKnown RBP9.49□□□□□ -0.89
HDAC6-221ENST00000477561 RCAN1P53805 252 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 SP4Q02446 784 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 STK3Q13188 491 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 DGKDQ16760 1214 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 HSDL1Q3SXM5 330 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 LRIT3Q3SXY7 679 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 PCNX4Q63HM2 1172 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 C16orf59Q7L2K0 433 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 CYFIP1Q7L576 1253 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 FBXL16Q8N461 479 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 KAT2BQ92831 832 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 EMID1Q96A84 441 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-221ENST00000477561 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-221ENST00000477561 NOC4LQ9BVI4 516 aaKnown RBP9.49□□□□□ -0.89
HDAC6-221ENST00000477561 HIPK3Q9H422 1215 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 RIC8AQ9NPQ8 531 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 BARHL2Q9NY43 387 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 PKD2L1Q9P0L9 805 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 TELO2Q9Y4R8 837 aa9.49□□□□□ -0.89
HDAC6-221ENST00000477561 KIAA1217Q5T5P2 1943 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 RBAK-RBAKDNI3L0D1 243 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 ADAMTS3O15072 1205 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 FIBPO43427 364 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 DTNBO60941 627 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 ATP9AO75110 1047 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 STAM2O75886 525 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 TGFB3P10600 412 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 SCG2P13521 617 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 ICAM3P32942 547 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 PSEN2P49810 448 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 ADCY7P51828 1080 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 AKAP17AQ02040 695 aaKnown RBP9.48□□□□□ -0.89
HDAC6-221ENST00000477561 NTRK3Q16288 839 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 PKN1Q16512 942 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-221ENST00000477561 JAKMIP3Q5VZ66 844 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 NFRKBQ6P4R8 1299 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 Q7L0L9 218 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 NLRX1Q86UT6 975 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 PPTC7Q8NI37 304 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 SCLYQ96I15 445 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 RNPC3Q96LT9 517 aaKnown RBP9.48□□□□□ -0.89
HDAC6-221ENST00000477561 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.48□□□□□ -0.895e-7■■■□□ 15.3
HDAC6-221ENST00000477561 SLC26A6Q9BXS9 759 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 SEZ6LQ9BYH1 1024 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 TM6SF1Q9BZW5 370 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
HDAC6-221ENST00000477561 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PPFIA4O75335 1185 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 SUPT20HL2P0C7V6 817 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 ITGB5P18084 799 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 EVCP57679 992 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 ZNF200P98182 395 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PPIGQ13427 754 aaKnown RBP eCLIP9.47□□□□□ -0.891e-7■■■□□ 17.1
HDAC6-221ENST00000477561 NEDD9Q14511 834 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 MFSD10Q14728 455 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PTGISQ16647 500 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 KIAA0753Q2KHM9 967 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 TMEM240Q5SV17 173 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 UTP14CQ5TAP6 766 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms