RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 PARP9Q8IXQ6 854 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 CHP1Q99653 195 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 C6orf50Q9HD87 102 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 REXO2Q9Y3B8 237 aaKnown RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 A6NNZ2 444 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 H7C1D1 291 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 FCER1AP12319 257 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 AKR1B1P15121 316 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 PLCG2P16885 1265 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 LSP1P33241 339 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 PRPHP41219 470 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 NT5C2P49902 561 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 RNF187Q5TA31 235 aaPredicted RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 SOGA3Q5TF21 947 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 PAPD7Q5XG87 772 aaKnown RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 C6orf89Q6UWU4 347 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 SND1Q7KZF4 910 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 ZNF473Q8WTR7 871 aaKnown RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 HINFPQ9BQA5 517 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 EPN3Q9H201 632 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 DDX4Q9NQI0 724 aaKnown RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 SAR1BQ9Y6B6 198 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 PDE2AO00408 941 aaPredicted RBP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 ADRA2BP18089 450 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 KCNB1Q14721 858 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 CYB5D1Q6P9G0 228 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 FUKQ8N0W3 1084 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 TSEN2Q8NCE0 465 aaKnown RBP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 GIMAP8Q8ND71 665 aaPredicted RBP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 CCDC51Q96ER9 411 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 CAPZA3Q96KX2 299 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
CCNL1-216ENST00000475298 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 TPX2Q9ULW0 747 aaKnown RBP14.35□□□□□ -0.11
CCNL1-216ENST00000475298 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 LAD1O00515 517 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 GNA11P29992 359 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 TXKP42681 527 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 ATP1A2P50993 1020 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 PDE4DQ08499 809 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 STK4Q13043 487 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 TTI2Q6NXR4 508 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
CCNL1-216ENST00000475298 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
CCNL1-216ENST00000475298 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
CCNL1-216ENST00000475298 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 GUCA1BQ9UMX6 200 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 PSMA7O14818 248 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 OPA1O60313 960 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 BBOX1O75936 387 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 ASIC1P78348 528 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 IFT88Q13099 833 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 SPRED3Q2MJR0 410 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 MB21D1Q8N884 522 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 ARMC2Q8NEN0 867 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
CCNL1-216ENST00000475298 DUSP9Q99956 384 aaKnown RBP14.34□□□□□ -0.11
CCNL1-216ENST00000475298 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 GGA2Q9UJY4 613 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 AFF2P51816 1311 aa14.34□□□□□ -0.11
CCNL1-216ENST00000475298 LGALS16A8MUM7 142 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 B4DLN1 442 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 POLRMTO00411 1230 aaKnown RBP14.33□□□□□ -0.11
CCNL1-216ENST00000475298 SLC37A4O43826 429 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 KLK7P49862 253 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 SCNN1DP51172 638 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 E2F5Q15329 346 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 MAB21L3Q8N8X9 362 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 TFR2Q9UP52 801 aa14.33□□□□□ -0.11
CCNL1-216ENST00000475298 EDIL3O43854 480 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 TDP2O95551 362 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 EZRP15311 586 aaKnown RBP14.33□□□□□ -0.12
CCNL1-216ENST00000475298 CDR1P51861 262 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 HDLBPQ00341 1268 aaKnown RBP14.33□□□□□ -0.12
CCNL1-216ENST00000475298 GUCY1A3Q02108 690 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 ZNF507Q8TCN5 953 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 ADAMTSL1Q8N6G6 1762 aa14.33□□□□□ -0.12
CCNL1-216ENST00000475298 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
CCNL1-216ENST00000475298 ZNF185O15231 689 aa14.32□□□□□ -0.12
CCNL1-216ENST00000475298 SEC24CP53992 1094 aa14.32□□□□□ -0.12
CCNL1-216ENST00000475298 C2orf54Q08AI8 447 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms