RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 NDUFA8P51970 172 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 SNW1Q13573 536 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 ZNF174Q15697 407 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 GPAT2Q6NUI2 795 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 PPP1R18Q6NYC8 613 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 GADL1Q6ZQY3 521 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PRRT2Q7Z6L0 340 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PROCA1Q8NCQ7 364 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 AMNQ9BXJ7 453 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 RBSNQ9H1K0 784 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 RANBP17Q9H2T7 1088 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 FBXO28Q9NVF7 368 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PCDHA6Q9UN73 950 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PCDHA8Q9Y5H6 950 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 DNAH12Q6ZR08 3092 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 ATRXP46100 2492 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PLXNB2O15031 1838 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 FAM237AA0A1B0GTK4 181 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 CTAGE5O15320 804 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PPP1R11O60927 126 aaPredicted RBP9.48□□□□□ -0.89
FDPS-209ENST00000471117 ZBED4O75132 1171 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PFKFB1P16118 471 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 ADCY7P51828 1080 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 EPHB4P54760 987 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 SNAP25P60880 206 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PABPC4Q13310 644 aaKnown RBP eCLIP9.48□□□□□ -0.89
FDPS-209ENST00000471117 COG2Q14746 738 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 AAK1Q2M2I8 961 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 RESP18Q5W5W9 173 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 SHC4Q6S5L8 630 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 RBM43Q6ZSC3 357 aaKnown RBP9.48□□□□□ -0.89
FDPS-209ENST00000471117 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 FBXO11Q86XK2 927 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 CKAP2LQ8IYA6 745 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 TRIB2Q92519 343 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 FUCA2Q9BTY2 467 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 GLT8D2Q9H1C3 349 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PPP1R9AQ9ULJ8 1098 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
FDPS-209ENST00000471117 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
FDPS-209ENST00000471117 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
FDPS-209ENST00000471117 CFAP54Q96N23 3096 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.47□□□□□ -0.89
FDPS-209ENST00000471117 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.47□□□□□ -0.89
FDPS-209ENST00000471117 ZNF202O95125 648 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 CCDC192P0DO97 292 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
FDPS-209ENST00000471117 MCM7P33993 719 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 PBX2P40425 430 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 SYKP43405 635 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 GRIN1Q05586 938 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 PTGDRQ13258 359 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 INF2Q27J81 1249 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 LHX8Q68G74 356 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 CATSPERGQ6ZRH7 1159 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 ANKRD13CQ8N6S4 541 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
FDPS-209ENST00000471117 SDF4Q9BRK5 362 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 CD320Q9NPF0 282 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 HOXC10Q9NYD6 342 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 AGTPBP1Q9UPW5 1226 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 HPSEQ9Y251 543 aa9.47□□□□□ -0.89
FDPS-209ENST00000471117 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 CYP2B6P20813 491 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 HOXA7P31268 230 aaPredicted RBP9.46□□□□□ -0.9
FDPS-209ENST00000471117 DSG3P32926 999 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 MRPL12P52815 198 aaKnown RBP9.46□□□□□ -0.9
FDPS-209ENST00000471117 IRX3P78415 501 aaPredicted RBP9.46□□□□□ -0.9
FDPS-209ENST00000471117 ATP2C1P98194 919 aaPredicted RBP9.46□□□□□ -0.9
FDPS-209ENST00000471117 TYRO3Q06418 890 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.9
FDPS-209ENST00000471117 USH1GQ495M9 461 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 SPECC1Q5M775 1068 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 TREML2Q5T2D2 321 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
FDPS-209ENST00000471117 C4orf32Q8N8J7 132 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 CUL5Q93034 780 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 ATG4CQ96DT6 458 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 PANK2Q9BZ23 570 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 SLC38A10Q9HBR0 1119 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 RIC8AQ9NPQ8 531 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 TMEM260Q9NX78 707 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 FAM13BQ9NYF5 915 aa9.46□□□□□ -0.9
FDPS-209ENST00000471117 KCNH3Q9ULD8 1083 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms