RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 PARNO95453 639 aaKnown RBP17.7■□□□□ 0.42
FDPS-208ENST00000470171 SCG2P13521 617 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 PDIA3P30101 505 aaKnown RBP17.7■□□□□ 0.42
FDPS-208ENST00000470171 CDC27P30260 824 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
FDPS-208ENST00000470171 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
FDPS-208ENST00000470171 WWC2Q6AWC2 1192 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 METTL7BQ6UX53 244 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 CCDC155Q8N6L0 562 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 SPATA33Q96N06 139 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 PCDHA6Q9UN73 950 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 PCDHA8Q9Y5H6 950 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 FRMPD3Q5JV73 1810 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 STXBP3O00186 592 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 NOP56O00567 594 aaKnown RBP17.69■□□□□ 0.42
FDPS-208ENST00000470171 CPLX1O14810 134 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 GGPS1O95749 300 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 PFKMP08237 780 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 TMEM63BQ5T3F8 832 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 RAB11FIP4Q86YS3 637 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 RPUSD2Q8IZ73 545 aaKnown RBP17.69■□□□□ 0.42
FDPS-208ENST00000470171 COPS5Q92905 334 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
FDPS-208ENST00000470171 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 ZMYND12Q9H0C1 365 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 MTIF3Q9H2K0 278 aaKnown RBP17.69■□□□□ 0.42
FDPS-208ENST00000470171 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 CEP290O15078 2479 aa17.69■□□□□ 0.42
FDPS-208ENST00000470171 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 F2P00734 622 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 UBA1P22314 1058 aaKnown RBP17.68■□□□□ 0.42
FDPS-208ENST00000470171 RFC2P35250 354 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
FDPS-208ENST00000470171 BFSP2Q13515 415 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 PSRC1Q6PGN9 363 aaPredicted RBP17.68■□□□□ 0.42
FDPS-208ENST00000470171 HIPK3Q9H422 1215 aa17.68■□□□□ 0.42
FDPS-208ENST00000470171 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 CPA1P15085 419 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
FDPS-208ENST00000470171 NTRK3Q16288 839 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 IL31RAQ8NI17 732 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 CAGE1Q8TC20 777 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.423e-6■□□□□ 10.1
FDPS-208ENST00000470171 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 NOD1Q9Y239 953 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 UBIAD1Q9Y5Z9 338 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 DNAH12Q6ZR08 3092 aa17.67■□□□□ 0.42
FDPS-208ENST00000470171 B4GALT4O60513 344 aa17.66■□□□□ 0.42
FDPS-208ENST00000470171 GNAT1P11488 350 aa17.66■□□□□ 0.42
FDPS-208ENST00000470171 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
FDPS-208ENST00000470171 PSMC6P62333 389 aa17.66■□□□□ 0.42
FDPS-208ENST00000470171 SSRP1Q08945 709 aaKnown RBP17.66■□□□□ 0.42
FDPS-208ENST00000470171 MTMR1Q13613 665 aa17.66■□□□□ 0.42
FDPS-208ENST00000470171 FAM109BQ6ICB4 259 aaPredicted RBP17.66■□□□□ 0.42
FDPS-208ENST00000470171 RETREG2Q8NC44 543 aa17.66■□□□□ 0.42
FDPS-208ENST00000470171 ZNF215Q9UL58 517 aaPredicted RBP17.66■□□□□ 0.42
FDPS-208ENST00000470171 SMCHD1A6NHR9 2005 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 HAS3O00219 553 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 DEXIO95424 95 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 XBP1P17861 261 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 SREBF1P36956 1147 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
FDPS-208ENST00000470171 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 NOC4LQ9BVI4 516 aaKnown RBP17.65■□□□□ 0.42
FDPS-208ENST00000470171 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
FDPS-208ENST00000470171 RPLP2P05387 115 aaKnown RBP17.64■□□□□ 0.41
FDPS-208ENST00000470171 CYP3A4P08684 503 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 PSEN2P49810 448 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
FDPS-208ENST00000470171 SP2Q02086 613 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 MFSD10Q14728 455 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 WASF1Q92558 559 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 KAT2BQ92831 832 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 SLC26A6Q9BXS9 759 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 ANO3Q9BYT9 981 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
FDPS-208ENST00000470171 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 IL23AQ9NPF7 189 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 GTF2IRD1Q9UHL9 959 aa17.64■□□□□ 0.41
FDPS-208ENST00000470171 TMEM265A0A087WTH1 108 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 H3BRB1 525 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 ITGB5P18084 799 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 ITGB8P26012 769 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 RBL2Q08999 1139 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 PKN1Q16512 942 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 PTGISQ16647 500 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 UBE2SQ16763 222 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 KIAA0753Q2KHM9 967 aa17.63■□□□□ 0.41
FDPS-208ENST00000470171 CYFIP1Q7L576 1253 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms