RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 GPRC5CQ9NQ84 441 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 INVSQ9Y283 1065 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 C1QTNF3-AMACRE9PGA6 284 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 SGSM2O43147 1006 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
SCFD1-205ENST00000469043 HSD3B2P26439 372 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 SCRN1Q12765 414 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 SURF1Q15526 300 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 IQCEQ6IPM2 695 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 VHLLQ6RSH7 139 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 MIB1Q86YT6 1006 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 EXOC8Q8IYI6 725 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 BVESQ8NE79 360 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 GPRASP2Q96D09 838 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 BTG4Q9NY30 223 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
SCFD1-205ENST00000469043 C22orf46C9J442 243 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 MATN3O15232 486 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 AKAP8O43823 692 aaKnown RBP6.26□□□□□ -1.41
SCFD1-205ENST00000469043 PARNO95453 639 aaKnown RBP6.26□□□□□ -1.41
SCFD1-205ENST00000469043 ZNF20P17024 532 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 CASP7P55210 303 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 MILR1Q7Z6M3 343 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 TXNDC5Q8NBS9 432 aaKnown RBP6.26□□□□□ -1.41
SCFD1-205ENST00000469043 DPF3Q92784 378 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 PRDM16Q9HAZ2 1276 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 SRRDQ9UH36 339 aa6.26□□□□□ -1.41
SCFD1-205ENST00000469043 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 THBDP07204 575 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 ZNF143P52747 638 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 MROH9Q5TGP6 573 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 STK32CQ86UX6 486 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 TEX2Q8IWB9 1127 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 FAM26EQ8N5C1 309 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 RASGRP4Q8TDF6 673 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 DVL3Q92997 716 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 LCORQ96JN0 433 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 SYT3Q9BQG1 590 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 YIPF4Q9BSR8 244 aa6.25□□□□□ -1.41
SCFD1-205ENST00000469043 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 MRPL42Q9Y6G3 142 aaKnown RBP6.25□□□□□ -1.41
SCFD1-205ENST00000469043 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 FSHBP01225 129 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 SLC6A11P48066 632 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 ITGA1P56199 1179 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 RPL11P62913 178 aaKnown RBP6.24□□□□□ -1.41
SCFD1-205ENST00000469043 NKX3-2P78367 333 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 HSP90AB2PQ58FF8 381 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 MBLAC2Q68D91 279 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 VPS37DQ86XT2 251 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 ZNF513Q8N8E2 541 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-205ENST00000469043 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 APEX2Q9UBZ4 518 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 COL4A3BPQ9Y5P4 624 aa6.24□□□□□ -1.41
SCFD1-205ENST00000469043 MAP4K4O95819 1239 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-205ENST00000469043 GTF2A2P52657 109 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 NFE2L2Q16236 605 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 INF2Q27J81 1249 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 PRR31Q5SQ13 230 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 PRAMEF18Q5VWM3 479 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 GTF2IRD2BQ6EKJ0 949 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 CEP68Q76N32 757 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 FILIP1Q7Z7B0 1213 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 GTF2IRD2Q86UP8 949 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 MCF2L2Q86YR7 1114 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 RIOX2Q8IUF8 465 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-205ENST00000469043 TRMT2BQ96GJ1 504 aaKnown RBP6.23□□□□□ -1.41
SCFD1-205ENST00000469043 SHDQ96IW2 340 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
SCFD1-205ENST00000469043 MYO1BO43795 1136 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 PEX14O75381 377 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 CYP1A1P04798 512 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-205ENST00000469043 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-205ENST00000469043 NCAPHQ15003 741 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 TAF7LQ5H9L4 462 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 LIMS2Q7Z4I7 341 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 TRIM59Q8IWR1 403 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 SLC16A11Q8NCK7 471 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 MORC4Q8TE76 937 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 BCCIPQ9P287 314 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCFD1-205ENST00000469043 CHPF2Q9P2E5 772 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 ST6GALNAC2Q9UJ37 374 aa6.22□□□□□ -1.41
SCFD1-205ENST00000469043 LAMTOR5O43504 91 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 CYP7B1O75881 506 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 STAT5AP42229 794 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 CHRNA2Q15822 529 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 E4F1Q66K89 784 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-205ENST00000469043 FRS2Q8WU20 508 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 SEC16BQ96JE7 1060 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 SSBP3Q9BWW4 388 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-205ENST00000469043 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms