RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 DUSP28Q4G0W2 176 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 SENP7Q9BQF6 1050 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 ZSCAN16Q9H4T2 348 aaPredicted RBP18.18■□□□□ 0.5
GPC1-207ENST00000466624 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
GPC1-207ENST00000466624 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
GPC1-207ENST00000466624 Q9Y3F1 56 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 MRVI1Q9Y6F6 885 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 DUSP11O75319 330 aaKnown RBP18.17■□□□□ 0.5
GPC1-207ENST00000466624 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
GPC1-207ENST00000466624 SMPD1P17405 629 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 SEMA3FQ13275 785 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 RILPL1Q5EBL4 403 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 CYP2W1Q8TAV3 490 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 LENG9Q96B70 501 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 ZFP91Q96JP5 570 aaPredicted RBP18.17■□□□□ 0.5
GPC1-207ENST00000466624 RNF208Q9H0X6 261 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 GNEQ9Y223 722 aaKnown RBP18.17■□□□□ 0.5
GPC1-207ENST00000466624 DOCK5Q9H7D0 1870 aa18.17■□□□□ 0.5
GPC1-207ENST00000466624 CENPFP49454 3210 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.16■□□□□ 0.5
GPC1-207ENST00000466624 ADCY6O43306 1168 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
GPC1-207ENST00000466624 ARIH2O95376 493 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 TDP2O95551 362 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 RARBP10826 455 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 DDIT3P35638 169 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 RESTQ13127 1097 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 NEDD9Q14511 834 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 LHX8Q68G74 356 aa18.16■□□□□ 0.5
GPC1-207ENST00000466624 GIMAP8Q8ND71 665 aaPredicted RBP18.16■□□□□ 0.5
GPC1-207ENST00000466624 GJB1P08034 283 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 ZSCAN22P10073 491 aaPredicted RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 ARP10275 920 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 NKX3-2P78367 333 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 PRR16Q569H4 304 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 MYSM1Q5VVJ2 828 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 UPF3AQ9H1J1 476 aaKnown RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 AGO4Q9HCK5 861 aaKnown RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
GPC1-207ENST00000466624 NFASCO94856 1347 aa18.15■□□□□ 0.5
GPC1-207ENST00000466624 TBX3O15119 743 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 BRD1O95696 1058 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 GH1P01241 217 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 KCNA2P16389 499 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 GJA9P57773 515 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 LY6KQ17RY6 165 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 TTC38Q5R3I4 469 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
GPC1-207ENST00000466624 SLC37A4O43826 429 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 F13A1P00488 732 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 TOB1P50616 345 aaPredicted RBP18.13■□□□□ 0.49
GPC1-207ENST00000466624 SP2Q02086 613 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 LAMC2Q13753 1193 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 CELF3Q5SZQ8 465 aaKnown RBP18.13■□□□□ 0.49
GPC1-207ENST00000466624 TLK2Q86UE8 772 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 DEFB118Q96PH6 123 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 CRISPLD2Q9H0B8 497 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 KCNMB3Q9NPA1 279 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 XPNPEP3Q9NQH7 507 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 TBC1D22BQ9NU19 505 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 OGDHLQ9ULD0 1010 aa18.13■□□□□ 0.49
GPC1-207ENST00000466624 IPO5O00410 1097 aaKnown RBP18.12■□□□□ 0.49
GPC1-207ENST00000466624 WNT7AO00755 349 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 MSH4O15457 936 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 NEMFO60524 1076 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 ATP9AO75110 1047 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 ADAMTS4O75173 837 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 SGPL1O95470 568 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 GGPS1O95749 300 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 CST5P28325 142 aaPredicted RBP18.12■□□□□ 0.49
GPC1-207ENST00000466624 GJA8P48165 433 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 NUCB2P80303 420 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 ARHGAP1Q07960 439 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 PKP1Q13835 747 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 TMEM63BQ5T3F8 832 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 DHX37Q8IY37 1157 aaKnown RBP18.12■□□□□ 0.49
GPC1-207ENST00000466624 ETNPPLQ8TBG4 499 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 SLC5A5Q92911 643 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 ABHD8Q96I13 439 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
GPC1-207ENST00000466624 RIT2Q99578 217 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 AP5M1Q9H0R1 490 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 SPC25Q9HBM1 224 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.12■□□□□ 0.49
GPC1-207ENST00000466624 SYNRGQ9UMZ2 1314 aa18.12■□□□□ 0.49
GPC1-207ENST00000466624 KIAA0100Q14667 2235 aaKnown RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 DHX15O43143 795 aaKnown RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 FARP2O94887 1054 aaPredicted RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 MYCP01106 439 aaPredicted RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 ATP2B1P20020 1258 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 ITGB3BPQ13352 177 aaPredicted RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 GJC2Q5T442 439 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms