RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DEFB103AP81534 67 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 GRB10Q13322 594 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 BFSP2Q13515 415 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 PTGISQ16647 500 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 LY6KQ17RY6 165 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 BRDTQ58F21 947 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 TRAF7Q6Q0C0 670 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 CYB5R4Q7L1T6 521 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ENAHQ8N8S7 591 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 CAGE1Q8TC20 777 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 AFAP1L1Q8TED9 768 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ARNTL2Q8WYA1 636 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ESR2Q92731 530 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 WNT8BQ93098 351 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 TAAR1Q96RJ0 339 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZSWIM5Q9P217 1185 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 RBM8AQ9Y5S9 174 aaKnown RBP9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ABCB11O95342 1321 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZNF318Q5VUA4 2279 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 NBNO60934 754 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 GH1P01241 217 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 GHRHRQ02643 423 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 HIC1Q14526 733 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 MBTPS1Q14703 1052 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 SEC23AQ15436 765 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 SEPT14Q6ZU15 432 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 LRRC8DQ7L1W4 858 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 DGKHQ86XP1 1220 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 MB21D2Q8IYB1 491 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 ADGRF4Q8IZF3 695 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 GDPD5Q8WTR4 605 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 ANKS1AQ92625 1134 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 MPHOSPH6Q99547 160 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 FTOQ9C0B1 505 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 MAF1Q9H063 256 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
CDC42BPA-210ENST00000462553 E7EWF7 191 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 HAS3O00219 553 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 TLL1O43897 1013 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CDC45O75419 566 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 RGS20O76081 388 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 F2P00734 622 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZNF286BP0CG31 522 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CKBP12277 381 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 HOXD8P13378 290 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 SELPP16109 830 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 ANTXR2P58335 489 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CHMP4BP1P59074 171 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 SKIV2LQ15477 1246 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 AAK1Q2M2I8 961 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CHST3Q7LGC8 479 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 NSUN6Q8TEA1 469 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 IWS1Q96ST2 819 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZSCAN10Q96SZ4 725 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 RMDN3Q96TC7 470 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 KRT23Q9C075 422 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 CNNM2Q9H8M5 875 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 JMJD4Q9H9V9 463 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 PXMP2Q9NR77 195 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 HDAC6Q9UBN7 1215 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 DDX41Q9UJV9 622 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
CDC42BPA-210ENST00000462553 B4DLN1 442 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 SLC27A2O14975 620 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 ST18O60284 1047 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 GJB5O95377 273 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 EIF2AK2P19525 551 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 PLA2G5P39877 138 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 KCNJ6P48051 423 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 PSEN2P49810 448 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 HSD17B4P51659 736 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 MFSD10Q14728 455 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 NECTIN1Q15223 517 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 STXBP2Q15833 593 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 SLC35G1Q2M3R5 365 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 CREB3L3Q68CJ9 461 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 IQCA1Q86XH1 822 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 STAG2Q8N3U4 1231 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 IL31RAQ8NI17 732 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 PPTC7Q8NI37 304 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.942e-7■■■□□ 17.6
CDC42BPA-210ENST00000462553 MTMR8Q96EF0 704 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 SENP2Q9HC62 589 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms