RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TGFB3P10600 412 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
SF3A3-204ENST00000462258 CCL23P55773 120 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 MRPS9P82933 396 aaKnown RBP11.7□□□□□ -0.54
SF3A3-204ENST00000462258 UBE2SQ16763 222 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
SF3A3-204ENST00000462258 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 MYSM1Q5VVJ2 828 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 KAT2BQ92831 832 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 SPATA33Q96N06 139 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 COL6A3P12111 3177 aa11.7□□□□□ -0.54
SF3A3-204ENST00000462258 TRIP12Q14669 1992 aaPredicted RBP11.69□□□□□ -0.54
SF3A3-204ENST00000462258 SPDYE3A6NKU9 549 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
SF3A3-204ENST00000462258 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 ICAM3P32942 547 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 PSEN2P49810 448 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 NAPAP54920 295 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 SP2Q02086 613 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 APOBRQ0VD83 1088 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 FUT2Q10981 343 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 HSDL1Q3SXM5 330 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 ERICH6BQ5W0A0 696 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
SF3A3-204ENST00000462258 XRRA1Q6P2D8 792 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 Q6ZUG5 572 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 C16orf59Q7L2K0 433 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 SESTD1Q86VW0 696 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
SF3A3-204ENST00000462258 BRF1Q92994 677 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 SCLYQ96I15 445 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 MTMR10Q9NXD2 777 aa11.69□□□□□ -0.54
SF3A3-204ENST00000462258 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
SF3A3-204ENST00000462258 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
SF3A3-204ENST00000462258 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
SF3A3-204ENST00000462258 PSMA5P28066 241 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 CDC27P30260 824 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 NEDD9Q14511 834 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 MFSD10Q14728 455 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 PTGISQ16647 500 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 RASIP1Q5U651 963 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
SF3A3-204ENST00000462258 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 METTL7BQ6UX53 244 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 C7orf31Q8N865 590 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 MTIF3Q9H2K0 278 aaKnown RBP11.68□□□□□ -0.54
SF3A3-204ENST00000462258 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 RTEL1Q9NZ71 1219 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 GTF2IRD1Q9UHL9 959 aa11.68□□□□□ -0.54
SF3A3-204ENST00000462258 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 STXBP3O00186 592 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 HAS3O00219 553 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 PFKMP08237 780 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 DNAJB2P25686 324 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 ADCY7P51828 1080 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 BFSP2Q13515 415 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 NLRX1Q86UT6 975 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 FBXL16Q8N461 479 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 CAGE1Q8TC20 777 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 HERVK_113Q902F9 699 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 GUCD1Q96NT3 240 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 FAM217BQ9NTX9 383 aaPredicted RBP11.67□□□□□ -0.54
SF3A3-204ENST00000462258 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
SF3A3-204ENST00000462258 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 PPFIA4O75335 1185 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 FGBP02675 491 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 LGALS2P05162 132 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 RFC2P35250 354 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 SP4Q02446 784 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 OTOP2Q7RTS6 562 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 RPUSD2Q8IZ73 545 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms