RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 CNPY2Q9Y2B0 182 aa11.38□□□□□ -0.59
VPS45-204ENST00000460366 SPDYE3A6NKU9 549 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
VPS45-204ENST00000460366 STAM2O75886 525 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 CYBAP13498 195 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 PDE4DQ08499 809 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 STXBP2Q15833 593 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 VSIG10LQ86VR7 867 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 FCHSD1Q86WN1 690 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 HSCBQ8IWL3 235 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 PHF20Q9BVI0 1012 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
VPS45-204ENST00000460366 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 PCDHA4Q9UN74 947 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
VPS45-204ENST00000460366 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
VPS45-204ENST00000460366 M0R2N6 131 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 SEPT4O43236 478 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 MSCO60682 206 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 ZNF865P0CJ78 1059 aaPredicted RBP11.36□□□□□ -0.59
VPS45-204ENST00000460366 CCND2P30279 289 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 TRIM32Q13049 653 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 TRIM29Q14134 588 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 PGM5Q15124 567 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 NPY5RQ15761 445 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 UBE2SQ16763 222 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 IQSEC1Q6DN90 963 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
VPS45-204ENST00000460366 KATNBL1Q9H079 304 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 SMC3Q9UQE7 1217 aa11.36□□□□□ -0.59
VPS45-204ENST00000460366 GJB1P08034 283 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 CCL5P13501 91 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
VPS45-204ENST00000460366 SREBF1P36956 1147 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 PCNX4Q63HM2 1172 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS45-204ENST00000460366 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 PAK6Q9NQU5 681 aaPredicted RBP11.35□□□□□ -0.59
VPS45-204ENST00000460366 FAM184BQ9ULE4 1060 aa11.35□□□□□ -0.59
VPS45-204ENST00000460366 PLXNA1Q9UIW2 1896 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 MMP1P03956 469 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 CYP3A4P08684 503 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 TGFB3P10600 412 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 AKR1A1P14550 325 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 GJB2P29033 226 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 MTFR1Q15390 333 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS45-204ENST00000460366 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 KRT40Q6A162 431 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 TAPT1Q6NXT6 567 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 CRYGNQ8WXF5 182 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 UNC93B1Q9H1C4 597 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
VPS45-204ENST00000460366 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 Q9Y3F1 56 aa11.34□□□□□ -0.59
VPS45-204ENST00000460366 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS45-204ENST00000460366 MAFGO15525 162 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 DTNBO60941 627 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 DUSP11O75319 330 aaKnown RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 ICAM3P32942 547 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 KRT2P35908 639 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 USP11P51784 963 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 NKX3-2P78367 333 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 GNPTABQ3T906 1256 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 WNT2BQ93097 391 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 TMEM260Q9NX78 707 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 UBIAD1Q9Y5Z9 338 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 RBBP6Q7Z6E9 1792 aaKnown RBP11.33□□□□□ -0.6
VPS45-204ENST00000460366 LCTP09848 1927 aa11.33□□□□□ -0.6
VPS45-204ENST00000460366 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms