RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 GNPTABQ3T906 1256 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 PCNX4Q63HM2 1172 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 HEATR3Q7Z4Q2 680 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 SCLYQ96I15 445 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 JAKMIP1Q96N16 626 aaKnown RBP21.78■■□□□ 1.08
COL5A1-203ENST00000460264 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 GOLGA8BA8MQT2 603 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 ICAM3P32942 547 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 RCAN1P53805 252 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 SEMA3FQ13275 785 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 XRRA1Q6P2D8 792 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 VWCEQ96DN2 955 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 FAM161BQ96MY7 647 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 GUCD1Q96NT3 240 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 KATNAL1Q9BW62 490 aa21.77■■□□□ 1.08
COL5A1-203ENST00000460264 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.76■■□□□ 1.07
COL5A1-203ENST00000460264 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.76■■□□□ 1.07
COL5A1-203ENST00000460264 SPATA31C2B4DYI2 1134 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 HAS3O00219 553 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 FIBPO43427 364 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 PSEN2P49810 448 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 UBE2SQ16763 222 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 WWC2Q6AWC2 1192 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 GDF6Q6KF10 455 aaPredicted RBP21.76■■□□□ 1.07
COL5A1-203ENST00000460264 HERVK_113Q902F9 699 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 CTAGE1Q96RT6 745 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 FAM217BQ9NTX9 383 aaPredicted RBP21.76■■□□□ 1.07
COL5A1-203ENST00000460264 RTEL1Q9NZ71 1219 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 NOD1Q9Y239 953 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 STXBP5LQ9Y2K9 1186 aa21.76■■□□□ 1.07
COL5A1-203ENST00000460264 PPFIA4O75335 1185 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 FGBP02675 491 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 FGD1P98174 961 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 MFSD10Q14728 455 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 PTGISQ16647 500 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 BLOC1S2Q6QNY1 142 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 TTYH1Q9H313 450 aaPredicted RBP21.75■■□□□ 1.07
COL5A1-203ENST00000460264 BCAS3Q9H6U6 928 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 MLXIPQ9HAP2 919 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 CXXC1Q9P0U4 656 aaPredicted RBP21.75■■□□□ 1.07
COL5A1-203ENST00000460264 GTF2IRD1Q9UHL9 959 aa21.75■■□□□ 1.07
COL5A1-203ENST00000460264 DNAJB2P25686 324 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 CDC27P30260 824 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 KIAA0753Q2KHM9 967 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 TYW1BQ6NUM6 668 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 RPUSD2Q8IZ73 545 aaKnown RBP21.74■■□□□ 1.07
COL5A1-203ENST00000460264 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 ALG1Q9BT22 464 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 SEMA6BQ9H3T3 888 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 HDAC6Q9UBN7 1215 aa21.74■■□□□ 1.07
COL5A1-203ENST00000460264 TMEM265A0A087WTH1 108 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 APOBRQ0VD83 1088 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 BFSP2Q13515 415 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 NEDD9Q14511 834 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 PPP1R18Q6NYC8 613 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 METTL7BQ6UX53 244 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 Q6ZUG5 572 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 OTOP2Q7RTS6 562 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 BRF1Q92994 677 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 C16orf70Q9BSU1 422 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 MTIF3Q9H2K0 278 aaKnown RBP21.73■■□□□ 1.07
COL5A1-203ENST00000460264 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 NAP1L2Q9ULW6 460 aaPredicted RBP21.73■■□□□ 1.07
COL5A1-203ENST00000460264 V9GY48 417 aaPredicted RBP21.73■■□□□ 1.07
COL5A1-203ENST00000460264 NID2Q14112 1375 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 TET1Q8NFU7 2136 aa21.73■■□□□ 1.07
COL5A1-203ENST00000460264 SPDYE3A6NKU9 549 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 GRXCR1A8MXD5 290 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 PFKMP08237 780 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 RFC2P35250 354 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 METAP2P50579 478 aaKnown RBP eCLIP21.72■■□□□ 1.07
COL5A1-203ENST00000460264 NAPAP54920 295 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 CYFIP1Q7L576 1253 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 FBXL16Q8N461 479 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 RETREG2Q8NC44 543 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 DHX38Q92620 1227 aaKnown RBP21.72■■□□□ 1.07
COL5A1-203ENST00000460264 CHD9Q3L8U1 2897 aa21.72■■□□□ 1.07
COL5A1-203ENST00000460264 hCG_1984214I3L0E3 225 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 STXBP3O00186 592 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 NOP56O00567 594 aaKnown RBP21.71■■□□□ 1.07
COL5A1-203ENST00000460264 EPB41L2O43491 1005 aaKnown RBP21.71■■□□□ 1.07
COL5A1-203ENST00000460264 LGALS2P05162 132 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 IQCF3P0C7M6 154 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 DEFB128Q7Z7B8 93 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 NLRX1Q86UT6 975 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 TEX2Q8IWB9 1127 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 CCDC155Q8N6L0 562 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 ZNF713Q8N859 430 aaPredicted RBP21.71■■□□□ 1.07
COL5A1-203ENST00000460264 CAGE1Q8TC20 777 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 SENP7Q9BQF6 1050 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 AGXT2Q9BYV1 514 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 PCDHA6Q9UN73 950 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 PCDHA8Q9Y5H6 950 aa21.71■■□□□ 1.07
COL5A1-203ENST00000460264 ITGB5P18084 799 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 PSMA5P28066 241 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms