RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 R3HDMLQ9H3Y0 253 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SUV39H2Q9H5I1 410 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SH2D4AQ9H788 454 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 BCCIPQ9P287 314 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 GABBR1Q9UBS5 961 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SYNPO2Q9UMS6 1093 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ZNF232Q9UNY5 417 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 MRVI1Q9Y6F6 885 aa5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 GREB1LQ9C091 1923 aaPredicted RBP5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 IGKV6D-41A0A0C4DH26 115 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SMIM22K7EJ46 135 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 PDPK1O15530 556 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ORC4O43929 436 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 FGAP02671 866 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 APPP05067 770 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 AKR1B1P15121 316 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 GCLCP48506 637 aaPredicted RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 HMGCS2P54868 508 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SP3Q02447 781 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ICA1Q05084 483 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 PDE4BQ07343 736 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 PPARAQ07869 468 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 IFRD2Q12894 506 aaPredicted RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 CBLBQ13191 982 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SEPT2Q15019 361 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 RAB3GAP1Q15042 981 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ARHGEF6Q15052 776 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 TLR1Q15399 786 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 BMP2KLQ5H9B9 411 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ODR4Q5SWX8 454 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SH3PXD2AQ5TCZ1 1133 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 VPS53Q5VIR6 699 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 KIAA0319Q5VV43 1072 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 LBX2Q6XYB7 198 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 GADL1Q6ZQY3 521 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 CCDC129Q6ZRS4 1044 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SLITRK4Q8IW52 837 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 RUFY2Q8WXA3 655 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 LPAR1Q92633 364 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SHDQ96IW2 340 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 DSCC1Q9BVC3 393 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 SRRTQ9BXP5 876 aaKnown RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 TMOD4Q9NZQ9 345 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 NYAP2Q9P242 653 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 FOXD3Q9UJU5 478 aaPredicted RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 TMX2Q9Y320 296 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 GPC6Q9Y625 555 aaPredicted RBP5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 MYPNQ86TC9 1320 aa5.47□□□□□ -1.53
RNU6ATAC28P-201ENST00000459249 A0A1W2PRG0 241 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 MINDY4BA8MYZ0 360 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 TGFBR3LH3BV60 316 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 PHACTR2O75167 634 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 VCAM1P19320 739 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 GARTP22102 1010 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 CHMLP26374 656 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ADD1P35611 737 aaKnown RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 NOVP48745 357 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 PRMT2P55345 433 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 CLN3Q13286 438 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 SQSTM1Q13501 440 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 GRIN2CQ14957 1233 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 TCEA2Q15560 299 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 FAM110CQ1W6H9 321 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 TREML2Q5T2D2 321 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 FBXL19Q6PCT2 694 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 FBXO46Q6PJ61 603 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 CWC27Q6UX04 472 aaKnown RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 SIAH1Q8IUQ4 282 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 C3orf58Q8NDZ4 430 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 OR6P1Q8NGX9 317 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 NEDD1Q8NHV4 660 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ACER1Q8TDN7 264 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ZNF669Q96BR6 464 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 RHOVQ96L33 236 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ASCC2Q9H1I8 757 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 RNF41Q9H4P4 317 aaPredicted RBP5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 VCPKMTQ9H867 229 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ZFYVE1Q9HBF4 777 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 ARHGEF10LQ9HCE6 1279 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 MORF4L1Q9UBU8 362 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 TCEAL9Q9UHQ7 104 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 MYH8P13535 1937 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 PCNTO95613 3336 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 CASP8AP2Q9UKL3 1982 aa5.46□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 A6NHS1 94 aa5.45□□□□□ -1.54
RNU6ATAC28P-201ENST00000459249 POTEB2H3BUK9 544 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms