RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 NOC4LQ9BVI4 516 aaKnown RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 PPP1R12CQ9BZL4 782 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 MLXIPQ9HAP2 919 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 ZSWIM6Q9HCJ5 1215 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 V9GY48 417 aaPredicted RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 LAMA2P24043 3122 aaKnown RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 hCG_1642624A0A1W2PR95 340 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 FIBPO43427 364 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 RGS20O76081 388 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 NEDD9Q14511 834 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 FAM47CQ5HY64 1035 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 GIMAP8Q8ND71 665 aaPredicted RBP20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 IL31RAQ8NI17 732 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 CDHR1Q96JP9 859 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 SPATA33Q96N06 139 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 AGXT2Q9BYV1 514 aa20.11■□□□□ 0.81
SCARNA2-201ENST00000458748 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 GGPS1O95749 300 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 FOSP01100 380 aaPredicted RBP20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 CSF2RAP15509 400 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 ICAM3P32942 547 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 CYP2C18P33260 490 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 ADCY7P51828 1080 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 PSRC1Q6PGN9 363 aaPredicted RBP20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 INPP4AQ96PE3 977 aaPredicted RBP20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 NOD1Q9Y239 953 aa20.1■□□□□ 0.81
SCARNA2-201ENST00000458748 NID2Q14112 1375 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 DLL1O00548 723 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 NOP56O00567 594 aaKnown RBP20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 UBA1P22314 1058 aaKnown RBP20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 CDC27P30260 824 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 FUT2Q10981 343 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 MCTP2Q6DN12 878 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 SESTD1Q86VW0 696 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 IL23AQ9NPF7 189 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 RIC8AQ9NPQ8 531 aa20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
SCARNA2-201ENST00000458748 HOXD8P13378 290 aaPredicted RBP20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 ADD1P35611 737 aaKnown RBP20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 EVCP57679 992 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 CHMP4BP1P59074 171 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 ANAPC15P60006 121 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 MRPS9P82933 396 aaKnown RBP20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 TMEM240Q5SV17 173 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 C16orf59Q7L2K0 433 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
SCARNA2-201ENST00000458748 SMCO2A6NFE2 343 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 SPATA31C2B4DYI2 1134 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 MAFGO15525 162 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 SCG2P13521 617 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 AP3B2Q13367 1082 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 UBE2SQ16763 222 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 PFKFB3Q16875 520 aaPredicted RBP20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 RPUSD2Q8IZ73 545 aaKnown RBP20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 CCDC155Q8N6L0 562 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 C7orf31Q8N865 590 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 KAT2BQ92831 832 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 GPRASP2Q96D09 838 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 SEMA6BQ9H3T3 888 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 FAM217BQ9NTX9 383 aaPredicted RBP20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
SCARNA2-201ENST00000458748 UMODL1Q5DID0 1318 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 STXBP3O00186 592 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 PITPNM1O00562 1244 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 PRPF3O43395 683 aaKnown RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 SP2Q02086 613 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 RASIP1Q5U651 963 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 METTL7BQ6UX53 244 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 CDX2Q99626 313 aaPredicted RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 WNT8AQ9H1J5 351 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 MTIF3Q9H2K0 278 aaKnown RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 TTYH1Q9H313 450 aaPredicted RBP20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 C6orf50Q9HD87 102 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
SCARNA2-201ENST00000458748 CPLX1O14810 134 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 F2P00734 622 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 FGBP02675 491 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 PFKMP08237 780 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 CYP2C9P11712 490 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 GNA11P29992 359 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 PDIA3P30101 505 aaKnown RBP20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 CCL23P55773 120 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 BFSP2Q13515 415 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 ZNF365Q70YC5 407 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 RETREG2Q8NC44 543 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 CCDC148Q8NFR7 591 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms