RNA–Protein interactions for RNA: ENST00000448467.1

SIRPAP1-201, Transcript of signal regulatory protein alpha pseudogene 1, humanhuman

BASIC

Gene SIRPAP1, Length 1,770 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP1-201ENST00000448467 UBASH3AP57075 661 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 TERF2Q15554 542 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 ELF2Q15723 593 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 FBXO38Q6PIJ6 1188 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 USP17L6PQ6QN14 398 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 RIOX2Q8IUF8 465 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 GTF3C2Q8WUA4 911 aaPredicted RBP20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 PSTPIP2Q9H939 334 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 TMEM260Q9NX78 707 aa20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
SIRPAP1-201ENST00000448467 A0A087WWV3 80 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 SLFN14P0C7P3 912 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 BCRP11274 1271 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 VSTM4Q8IW00 320 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 DIS3L2Q8IYB7 885 aaKnown RBP20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 DNAJC5GQ8N7S2 189 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 TRIML1Q8N9V2 468 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 CCDC148Q8NFR7 591 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 ERCC4Q92889 916 aaPredicted RBP20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 CCDC34Q96HJ3 373 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 SH3GLB2Q9NR46 395 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 MORF4L1Q9UBU8 362 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 DNAI1Q9UI46 699 aa20.27■□□□□ 0.84
SIRPAP1-201ENST00000448467 SERPINC1P01008 464 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 NR5A1Q13285 461 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 GNL2Q13823 731 aaKnown RBP20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 FAM110CQ1W6H9 321 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 KANK3Q6NY19 840 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 C6orf50Q9HD87 102 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 EFCAB8A8MWE9 144 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 hCG_1984214I3L0E3 225 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 TUBB4BP68371 445 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 NPY5RQ15761 445 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 SYT10Q6XYQ8 523 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 ZNF713Q8N859 430 aaPredicted RBP20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 ZMYND12Q9H0C1 365 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 ACAD9Q9H845 621 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 THSD7BQ9C0I4 1608 aa20.26■□□□□ 0.83
SIRPAP1-201ENST00000448467 CALML3P27482 149 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 PPP1R18Q6NYC8 613 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 SLC30A10Q6XR72 485 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 MLKLQ8NB16 471 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 UBXN4Q92575 508 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 CUL5Q93034 780 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 RIC8AQ9NPQ8 531 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 PCDHA4Q9UN74 947 aa20.25■□□□□ 0.83
SIRPAP1-201ENST00000448467 PTPREP23469 700 aa20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 KRT2P35908 639 aa20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 CCNA1P78396 465 aa20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 NAA30Q147X3 362 aaPredicted RBP20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 SAFBQ15424 915 aaKnown RBP eCLIP20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 BLIDQ8IZY5 108 aa20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 ANKRD35Q8N283 1001 aa20.24■□□□□ 0.83
SIRPAP1-201ENST00000448467 MEIS2O14770 477 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 STX10O60499 249 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 SLC25A27O95847 323 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 TRAF1Q13077 416 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 TKFCQ3LXA3 575 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 KRBA2Q6ZNG9 492 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 ZNF579Q8NAF0 562 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 MNS1Q8NEH6 495 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 CLIC6Q96NY7 704 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 ARHGAP39Q9C0H5 1083 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 FBXO2Q9UK22 296 aaPredicted RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 PCDHA6Q9UN73 950 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 PCDHA8Q9Y5H6 950 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 ZSWIM8A7E2V4 1837 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 FAM205CA6NFA0 338 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 PGK2P07205 417 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 POLR2MP0CAP2 368 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 GNA11P29992 359 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 MRPL12P52815 198 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 RPS6P62753 249 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 EARS2Q5JPH6 523 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 NT5DC1Q5TFE4 455 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 RNF207Q6ZRF8 634 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 KRI1Q8N9T8 703 aaKnown RBP20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 COL20A1Q9P218 1284 aa20.23■□□□□ 0.83
SIRPAP1-201ENST00000448467 CTGFP29279 349 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 TUBB2AQ13885 445 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 MCF2L2Q86YR7 1114 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 CNNM3Q8NE01 707 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 MMP19Q99542 508 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 BEGAINQ9BUH8 593 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 TUBB2BQ9BVA1 445 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 HSD3B7Q9H2F3 369 aa20.22■□□□□ 0.83
SIRPAP1-201ENST00000448467 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 301 ms