RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DHX15O43143 795 aaKnown RBP6.59□□□□□ -1.35
SDCBP-205ENST00000447267 PCSK2P16519 638 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 ADCYAP1R1P41586 468 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 SERPINB4P48594 390 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 SF3B3Q15393 1217 aaKnown RBP6.59□□□□□ -1.35
SDCBP-205ENST00000447267 LEXMQ3ZCV2 418 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 GADL1Q6ZQY3 521 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 MIGA2Q7L4E1 593 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 BMP8AQ7Z5Y6 402 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 FAM20CQ8IXL6 584 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 NKD2Q969F2 451 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-205ENST00000447267 THUMPD2Q9BTF0 503 aaKnown RBP6.59□□□□□ -1.35
SDCBP-205ENST00000447267 CEP41Q9BYV8 373 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 NRSN2Q9GZP1 204 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 IRF2BPLQ9H1B7 796 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 UBE2ZQ9H832 354 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-205ENST00000447267 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 SH3TC1Q8TE82 1336 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-205ENST00000447267 GNAT3A8MTJ3 354 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 DNM1LO00429 736 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 KIAA0355O15063 1070 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 PEX10O60683 326 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 CLTBP09497 229 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 CNGA1P29973 690 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 AVPR2P30518 371 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 NBL1P41271 181 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 MMP14P50281 582 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 AAMPQ13685 434 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 ANO1Q5XXA6 986 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 SHISA5Q8N114 240 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 FBXL6Q8N531 539 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 BSNDQ8WZ55 320 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 EDAQ92838 391 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 FAM89AQ96GI7 184 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 CHD9Q3L8U1 2897 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 MAST4O15021 2626 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 PLXNA3P51805 1871 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 PLXNA1Q9UIW2 1896 aa6.58□□□□□ -1.36
SDCBP-205ENST00000447267 OTOFQ9HC10 1997 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 CACNA1HO95180 2353 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 LRRC37AA6NMS7 1700 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 DDX60Q8IY21 1712 aaKnown RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 ICMTO60725 284 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 PQBP1O60828 265 aaKnown RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 CTSBP07858 339 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 ESRRAP11474 423 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 EDN3P14138 238 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 ZKSCAN1P17029 563 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 ZP2Q05996 745 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 NFIAQ12857 509 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 IKBKEQ14164 716 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 SNX17Q15036 470 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 EPHA10Q5JZY3 1008 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 LPAR1Q92633 364 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 PMEPA1Q969W9 287 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 TMPRSS13Q9BYE2 586 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 DDX20Q9UHI6 824 aaKnown RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 JAG2Q9Y219 1238 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 USP24Q9UPU5 2620 aa6.57□□□□□ -1.36
SDCBP-205ENST00000447267 SIPA1L3O60292 1781 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 RPAP1Q9BWH6 1393 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-205ENST00000447267 A0A1W2PP55 124 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-205ENST00000447267 BMP3P12645 472 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 CSF2RAP15509 400 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 KLRK1P26718 216 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 CACNB3P54284 484 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 ARHGAP4P98171 946 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 GRB10Q13322 594 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 TNFAIP1Q13829 316 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 HERC4Q5GLZ8 1057 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-205ENST00000447267 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 ANKRD34AQ69YU3 496 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-205ENST00000447267 SLC44A5Q8NCS7 719 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 ASAP3Q8TDY4 903 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 ARNTL2Q8WYA1 636 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 TCF12Q99081 682 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 FAM83CQ9BQN1 747 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 COA1Q9GZY4 146 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 PCMTD2Q9NV79 361 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 DLL3Q9NYJ7 618 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 MAST2Q6P0Q8 1798 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 FAM208BQ5VWN6 2430 aa6.56□□□□□ -1.36
SDCBP-205ENST00000447267 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 TECTAO75443 2155 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 XDHP47989 1333 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 GVINP1Q7Z2Y8 2422 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 MEGF11A6BM72 1044 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 KBTBD13C9JR72 458 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms