RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SPECC1L-ADORA2A	F8WAN1	911 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	AP3B1	O00203	1094 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	PHLPP1	O60346	1717 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	POR	P16435	677 aa	Predicted RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SERPINB4	P48594	390 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	KIF5A	Q12840	1032 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	MAP3K19	Q56UN5	1328 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	FOXB2	Q5VYV0	432 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	CCDC102B	Q68D86	513 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	FERD3L	Q96RJ6	166 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	CCT8L2	Q96SF2	557 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SEC62	Q99442	399 aa	Known RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SENP7	Q9BQF6	1050 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	UQCC2	Q9BRT2	126 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	DISC1	Q9NRI5	854 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	TYW1	Q9NV66	732 aa	Known RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	ETNK2	Q9NVF9	386 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	IMPACT	Q9P2X3	320 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	GGA2	Q9UJY4	613 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	NOX1	Q9Y5S8	564 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	LTN1	O94822	1766 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SHPRH	Q149N8	1683 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	KIF24	Q5T7B8	1368 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	VWA3A	A6NCI4	1184 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SNX2	O60749	519 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	DDHD2	O94830	711 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	GC	P02774	474 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SPATA31D3	P0C874	917 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	ANXA13	P27216	316 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	MZF1	P28698	734 aa	Predicted RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	LSP1	P33241	339 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	CACNB1	Q02641	598 aa	Predicted RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	CCDC122	Q5T0U0	273 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SYDE2	Q5VT97	1194 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	ALS2CL	Q60I27	953 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	C6orf89	Q6UWU4	347 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SPATA31D4	Q6ZUB0	917 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	NLRP14	Q86W24	1093 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	CCDC63	Q8NA47	563 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	LENG1	Q96BZ8	264 aa	Predicted RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	SMC6	Q96SB8	1091 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	PRPF18	Q99633	342 aa	Known RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	ERP44	Q9BS26	406 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	PANK4	Q9NVE7	773 aa		7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	FAM32A	Q9Y421	112 aa	Known RBP	7.43	□□□□□ -1.22
TRIM6-205	ENST00000445329	COL16A1	Q07092	1604 aa	Predicted RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SLIT3	O75094	1523 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	COL3A1	P02461	1466 aa	Predicted RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	WDR46	O15213	610 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	MAP3K7	O43318	606 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	TMCC2	O75069	709 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ALDH2	P05091	517 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PCNA	P12004	261 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ATP2A2	P16615	1042 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PIK3CA	P42336	1068 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ITGB3BP	Q13352	177 aa	Predicted RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	RIPK1	Q13546	671 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	RASIP1	Q5U651	963 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	TBC1D9B	Q66K14	1250 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	CYP26C1	Q6V0L0	522 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	RASEF	Q8IZ41	740 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SCAI	Q8N9R8	606 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	MYCBPAP	Q8TBZ2	947 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	COG1	Q8WTW3	980 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	CATSPER2	Q96P56	530 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	GBP5	Q96PP8	586 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PSKH2	Q96QS6	385 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	TCF12	Q99081	682 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	XPO4	Q9C0E2	1151 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	B3GNT4	Q9C0J1	378 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	NSRP1	Q9H0G5	558 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	GBA3	Q9H227	469 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	POLD4	Q9HCU8	107 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	TNFRSF10A	O00220	468 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	MAGEB3	O15480	346 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SEC24D	O94855	1032 aa	Predicted RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SKI	P12755	728 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	CCND1	P24385	295 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ETV3	P41162	512 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	POLD2	P49005	469 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SEC24C	P53992	1094 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	AKAP17A	Q02040	695 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	RALGDS	Q12967	914 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	E2F2	Q14209	437 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SH3D19	Q5HYK7	790 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PPP2R2D	Q66LE6	453 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SPICE1	Q8N0Z3	855 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	USHBP1	Q8N6Y0	703 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	TRIML2	Q8N7C3	387 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	SCG3	Q8WXD2	468 aa	Known RBP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	C8orf76	Q96K31	380 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PPP1R12C	Q9BZL4	782 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ZBTB21	Q9ULJ3	1066 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	ZBTB1	Q9Y2K1	713 aa		7.42	□□□□□ -1.22
TRIM6-205	ENST00000445329	PNPLA6	Q8IY17	1366 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms