RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ZBED4O75132 1171 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 CCNA1P78396 465 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 GHRHRQ02643 423 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 PTPAQ15257 358 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 EARS2Q5JPH6 523 aaKnown RBP13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 GTF3C2Q8WUA4 911 aaPredicted RBP13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 UHRF1Q96T88 793 aaPredicted RBP13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 ZNF576Q9H609 170 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 ZNF536O15090 1300 aa13.34□□□□□ -0.27
AC009404.1-202ENST00000439955 ADAMTS3O15072 1205 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 SPTLC2O15270 562 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 TRAK2O60296 914 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 GRB14Q14449 540 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 NBR1Q14596 966 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 SNX17Q15036 470 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 USH1GQ495M9 461 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 TTC38Q5R3I4 469 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 CCDC174Q6PII3 467 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 LBX2Q6XYB7 198 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 MB21D1Q8N884 522 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 ATXN2LQ8WWM7 1075 aaKnown RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 TIFAQ96CG3 184 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 NECAB3Q96P71 396 aaPredicted RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 NAP1L4Q99733 375 aaKnown RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 PRDM12Q9H4Q4 367 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 CCPG1Q9ULG6 757 aa13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
AC009404.1-202ENST00000439955 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 GOLGA6L4A6NEF3 574 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 OPLAHO14841 1288 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 HOXC6P09630 235 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 RAG1P15918 1043 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 PBX2P40425 430 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 SNAP25P60880 206 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 LRRC41Q15345 812 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 TKFCQ3LXA3 575 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 NEK8Q86SG6 692 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 DPP9Q86TI2 863 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 REPS2Q8NFH8 660 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 RASGRP4Q8TDF6 673 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 PCDHB6Q9Y5E3 794 aa13.32□□□□□ -0.28
AC009404.1-202ENST00000439955 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 GRXCR1A8MXD5 290 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 LAD1O00515 517 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 MEIS2O14770 477 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 PQBP1O60828 265 aaKnown RBP13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 CLTBP09497 229 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 FPGSQ05932 587 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 INF2Q27J81 1249 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 ADALQ6DHV7 355 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 MOXD1Q6UVY6 613 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 GAS2L1Q99501 681 aaPredicted RBP13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 ANP32EQ9BTT0 268 aa13.31□□□□□ -0.28
AC009404.1-202ENST00000439955 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 SEPT4O43236 478 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 GADD45BO75293 160 aaPredicted RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 IGHA2P01877 340 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 IGFBP4P22692 258 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ADORA2AP29274 412 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ME1P48163 572 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 HSD17B4P51659 736 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 UBE2SQ16763 222 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 JAKMIP3Q5VZ66 844 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ARL6IP4Q66PJ3 421 aaKnown RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 GPT2Q8TD30 523 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 AGBL1Q96MI9 1066 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 EHMT1Q9H9B1 1298 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 RAVER2Q9HCJ3 691 aaKnown RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 TMEM260Q9NX78 707 aa13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 ZNF214Q9UL59 606 aaPredicted RBP13.3□□□□□ -0.28
AC009404.1-202ENST00000439955 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms