RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
LINC01239-202ENST00000436786 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 SCFD2Q8WU76 684 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 ZKSCAN3Q9BRR0 538 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 UBA5Q9GZZ9 404 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 CPVLQ9H3G5 476 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 THEGQ9P2T0 379 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 PCDHA11Q9Y5I1 949 aa5.19□□□□□ -1.58
LINC01239-202ENST00000436786 CHD9Q3L8U1 2897 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 LCTP09848 1927 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 A6NJR5 290 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RFXAPO00287 272 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 KPNA6O60684 536 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RNF40O75150 1001 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 ARIH2O95376 493 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 TXNP10599 105 aaKnown RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 EDNRBP24530 442 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 CHMP4BP1P59074 171 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 MRPS5P82675 430 aaKnown RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 PPP2R5BQ15173 497 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 USH1GQ495M9 461 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 BRDTQ58F21 947 aaPredicted RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 PPP2R2DQ66LE6 453 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 NFRKBQ6P4R8 1299 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 TICAM2Q86XR7 235 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 ADAMTS19Q8TE59 1207 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 TBC1D5Q92609 795 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RILPL2Q969X0 211 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 LNPKQ9C0E8 428 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 PNMA2Q9UL42 364 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 ZMYM6O95789 1325 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 CCDC171Q6TFL3 1326 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 WDR19Q8NEZ3 1342 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 EYSQ5T1H1 3165 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 NKRFO15226 690 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 CA3P07451 260 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 PFKMP08237 780 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 IQCF3P0C7M6 154 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 PCP11498 1178 aaKnown RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 SNRPBP14678 240 aaKnown RBP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 SDSP20132 328 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 FOXC1Q12948 553 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 B4GALNT3Q6L9W6 998 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 CCDC62Q6P9F0 684 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 DGKHQ86XP1 1220 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 MICALL1Q8N3F8 863 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RETREG2Q8NC44 543 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RGS22Q8NE09 1264 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 DNERQ8NFT8 737 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 ESR2Q92731 530 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 TAAR1Q96RJ0 339 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 FTOQ9C0B1 505 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC01239-202ENST00000436786 CERS4Q9HA82 394 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 NEDD4P46934 1319 aa5.18□□□□□ -1.58
LINC01239-202ENST00000436786 RAD50Q92878 1312 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 EPOPA6NHQ4 379 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 B4DLN1 442 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ZNF213O14771 459 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ARHGEF15O94989 841 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ACTN1P12814 892 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 RFC2P35250 354 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 MRPL12P52815 198 aaKnown RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 FOXK2Q01167 660 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 PTPN11Q06124 597 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 CDC37Q16543 378 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 LY6KQ17RY6 165 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 TMEM67Q5HYA8 995 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 GPATCH4Q5T3I0 446 aaKnown RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 SEPT14Q6ZU15 432 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ADGRF4Q8IZF3 695 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 PNMA1Q8ND90 353 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 SYTL5Q8TDW5 730 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 AFG1LQ8WV93 481 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 CTAGE1Q96RT6 745 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 RNF41Q9H4P4 317 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 TOR4AQ9NXH8 423 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 COL20A1Q9P218 1284 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ABCB11O95342 1321 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 B4E1Z4 1266 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 KDM4AO75164 1064 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 BMP1P13497 986 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 MFAP1P55081 439 aaKnown RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 TFF2Q03403 129 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ARHGAP1Q07960 439 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 BFSP2Q13515 415 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 PTGISQ16647 500 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 CHST3Q7LGC8 479 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 HERC6Q8IVU3 1022 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ENAHQ8N8S7 591 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 PHOSPHO2Q8TCD6 241 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 NSUN6Q8TEA1 469 aaKnown RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ANKS1AQ92625 1134 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 KAT2BQ92831 832 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 NECAB3Q96P71 396 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 ZSCAN10Q96SZ4 725 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-202ENST00000436786 KAT14Q9H8E8 782 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 VAT1LQ9HCJ6 419 aa5.17□□□□□ -1.58
LINC01239-202ENST00000436786 PKD2L1Q9P0L9 805 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms