RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SCN5AQ14524 2016 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 CPA1P15085 419 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 RCAN1P53805 252 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 MRPS9P82933 396 aaKnown RBP20.21■□□□□ 0.83
NUP50-208ENST00000430547 TMEM240Q5SV17 173 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 PCNX4Q63HM2 1172 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 FAM109BQ6ICB4 259 aaPredicted RBP20.21■□□□□ 0.83
NUP50-208ENST00000430547 Q6ZUG5 572 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 INPP4AQ96PE3 977 aaPredicted RBP20.21■□□□□ 0.83
NUP50-208ENST00000430547 EHMT1Q9H9B1 1298 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 RTEL1Q9NZ71 1219 aa20.21■□□□□ 0.83
NUP50-208ENST00000430547 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 NOP56O00567 594 aaKnown RBP20.2■□□□□ 0.82
NUP50-208ENST00000430547 FIBPO43427 364 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 ZNF286BP0CG31 522 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 METAP2P50579 478 aaKnown RBP eCLIP20.2■□□□□ 0.82
NUP50-208ENST00000430547 NAPAP54920 295 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 NEDD9Q14511 834 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 ZNF365Q70YC5 407 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 RPUSD2Q8IZ73 545 aaKnown RBP20.2■□□□□ 0.82
NUP50-208ENST00000430547 CCDC155Q8N6L0 562 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 C7orf31Q8N865 590 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 BRF1Q92994 677 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 ALG1Q9BT22 464 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 WNT8AQ9H1J5 351 aa20.2■□□□□ 0.82
NUP50-208ENST00000430547 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.19■□□□□ 0.82
NUP50-208ENST00000430547 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.19■□□□□ 0.82
NUP50-208ENST00000430547 hCG_1984214I3L0E3 225 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
NUP50-208ENST00000430547 PPFIA4O75335 1185 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 FGBP02675 491 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 ICAM3P32942 547 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 PSEN2P49810 448 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 SP2Q02086 613 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 APOBRQ0VD83 1088 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 BFSP2Q13515 415 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 MFSD10Q14728 455 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 PTGISQ16647 500 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 UBE2SQ16763 222 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 HSDL1Q3SXM5 330 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 PPP1R18Q6NYC8 613 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 C16orf59Q7L2K0 433 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 ZNF713Q8N859 430 aaPredicted RBP20.19■□□□□ 0.82
NUP50-208ENST00000430547 RETREG2Q8NC44 543 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 KAT2BQ92831 832 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 SCLYQ96I15 445 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 FAM161BQ96MY7 647 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 MTMR10Q9NXD2 777 aa20.19■□□□□ 0.82
NUP50-208ENST00000430547 PITPNM1O00562 1244 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 F2P00734 622 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 RPS6KB1P23443 525 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 KIAA0753Q2KHM9 967 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 V9GY48 417 aaPredicted RBP20.18■□□□□ 0.82
NUP50-208ENST00000430547 GBF1Q92538 1859 aa20.18■□□□□ 0.82
NUP50-208ENST00000430547 SPATA31C2B4DYI2 1134 aa20.17■□□□□ 0.82
NUP50-208ENST00000430547 CYFIP1Q7L576 1253 aa20.17■□□□□ 0.82
NUP50-208ENST00000430547 CDHR1Q96JP9 859 aa20.17■□□□□ 0.82
NUP50-208ENST00000430547 GTF2IRD1Q9UHL9 959 aa20.17■□□□□ 0.82
NUP50-208ENST00000430547 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 PFKMP08237 780 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
NUP50-208ENST00000430547 CDC27P30260 824 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 ADCY7P51828 1080 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 FUT2Q10981 343 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 GDF6Q6KF10 455 aaPredicted RBP20.16■□□□□ 0.82
NUP50-208ENST00000430547 METTL7BQ6UX53 244 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 OTOP2Q7RTS6 562 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 TEX2Q8IWB9 1127 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 GIMAP8Q8ND71 665 aaPredicted RBP20.16■□□□□ 0.82
NUP50-208ENST00000430547 CAGE1Q8TC20 777 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 HERVK_113Q902F9 699 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 GLT8D2Q9H1C3 349 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 HDAC6Q9UBN7 1215 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 PCDHA6Q9UN73 950 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 PCDHA8Q9Y5H6 950 aa20.16■□□□□ 0.82
NUP50-208ENST00000430547 RFC2P35250 354 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 ADD1P35611 737 aaKnown RBP20.15■□□□□ 0.82
NUP50-208ENST00000430547 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 GPRASP2Q96D09 838 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
NUP50-208ENST00000430547 BARHL2Q9NY43 387 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 STXBP5LQ9Y2K9 1186 aa20.15■□□□□ 0.82
NUP50-208ENST00000430547 TMEM265A0A087WTH1 108 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 ZBBXA8MT70 800 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 STXBP3O00186 592 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 HAS3O00219 553 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 LGALS2P05162 132 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 ACTN1P12814 892 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 DNAJB2P25686 324 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
NUP50-208ENST00000430547 SP4Q02446 784 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 SEMA3FQ13275 785 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 MTMR1Q13613 665 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 RASIP1Q5U651 963 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms