RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
LINC00472-203ENST00000426635 CRACR2BQ8N4Y2 399 aaPredicted RBP18.65■□□□□ 0.58
LINC00472-203ENST00000426635 TEX9Q8N6V9 391 aa18.65■□□□□ 0.58
LINC00472-203ENST00000426635 PRDM1O75626 825 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 IL15P40933 162 aaPredicted RBP18.64■□□□□ 0.57
LINC00472-203ENST00000426635 MSH2P43246 934 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 POLE2P56282 527 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 ATP11AP98196 1134 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
LINC00472-203ENST00000426635 CNOT6LQ96LI5 555 aaKnown RBP18.64■□□□□ 0.57
LINC00472-203ENST00000426635 SYT15Q9BQS2 421 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 PUS3Q9BZE2 481 aaKnown RBP18.64■□□□□ 0.57
LINC00472-203ENST00000426635 TRIM4Q9C037 500 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 TRIM33Q9UPN9 1127 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 HGSO14964 777 aaPredicted RBP18.64■□□□□ 0.57
LINC00472-203ENST00000426635 IFNAR2P48551 515 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 CCDC178Q5BJE1 867 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 RRAGAQ7L523 313 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 CACNA2D4Q7Z3S7 1137 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
LINC00472-203ENST00000426635 PSMA7O14818 248 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 USP38Q8NB14 1042 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 FAM81AQ8TBF8 368 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 NRXN3Q9Y4C0 1643 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 HEG1Q9ULI3 1381 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 DHX9Q08211 1270 aaKnown RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 CUL1Q13616 776 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 HHATQ5VTY9 493 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 LRRC59Q96AG4 307 aaKnown RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 PRMT1Q99873 361 aaKnown RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 MMRN2Q9H8L6 949 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 GPR108Q9NPR9 543 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 SOS2Q07890 1332 aaPredicted RBP18.63■□□□□ 0.57
LINC00472-203ENST00000426635 GOLGA6L10A0A0M3HER8 536 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 SMIM23A6NLE4 172 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 PTPROQ16827 1216 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 SLC17A8Q8NDX2 589 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 AP1M1Q9BXS5 423 aa18.63■□□□□ 0.57
LINC00472-203ENST00000426635 PXDNQ92626 1479 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 A0A0G2JS52 829 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 TLDC2A0PJX2 215 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 GRID2IPA4D2P6 1211 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 LRRC53A6NM62 1247 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 DAPK3O43293 454 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 COQ9O75208 318 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 MYBP10242 640 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 ADAM9Q13443 819 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 MTMR3Q13615 1198 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 CUL3Q13618 768 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 LRRC23Q53EV4 343 aaPredicted RBP18.62■□□□□ 0.57
LINC00472-203ENST00000426635 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 RBM41Q96IZ5 413 aaKnown RBP18.62■□□□□ 0.57
LINC00472-203ENST00000426635 DUSP9Q99956 384 aaKnown RBP18.62■□□□□ 0.57
LINC00472-203ENST00000426635 ZMYND8Q9ULU4 1186 aaPredicted RBP18.62■□□□□ 0.57
LINC00472-203ENST00000426635 A0A1W2PQJ5 194 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 LIFRP42702 1097 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 SEPT2Q15019 361 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 MIIPQ5JXC2 388 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 TTC38Q5R3I4 469 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 RNF220Q5VTB9 566 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 CENPTQ96BT3 561 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 WDR35Q9P2L0 1181 aa18.62■□□□□ 0.57
LINC00472-203ENST00000426635 IQSEC3Q9UPP2 1182 aaPredicted RBP18.62■□□□□ 0.57
LINC00472-203ENST00000426635 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 PJA2O43164 708 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 ALDH3A1P30838 453 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 KRT2P35908 639 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 TDRD12Q587J7 1177 aaKnown RBP18.61■□□□□ 0.57
LINC00472-203ENST00000426635 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC00472-203ENST00000426635 PLIN2Q99541 437 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 NKX1-2Q9UD57 310 aaPredicted RBP18.61■□□□□ 0.57
LINC00472-203ENST00000426635 SLC4A4Q9Y6R1 1079 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 EYA2O00167 538 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 HIP1RO75146 1068 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 LCA5LO95447 670 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 STAT6P42226 847 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 FOXO4P98177 505 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 ZFAND2BQ8WV99 257 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 ATXN2LQ8WWM7 1075 aaKnown RBP18.61■□□□□ 0.57
LINC00472-203ENST00000426635 PNMA3Q9UL41 463 aa18.61■□□□□ 0.57
LINC00472-203ENST00000426635 F8VZ95 297 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 KCNK3O14649 394 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 ITGA6P23229 1130 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
LINC00472-203ENST00000426635 COPS2P61201 443 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 TMEM154Q6P9G4 183 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 RNF10Q8N5U6 811 aaKnown RBP18.6■□□□□ 0.57
LINC00472-203ENST00000426635 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 TLCD1Q96CP7 247 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 RPS6KC1Q96S38 1066 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 DDX47Q9H0S4 455 aaKnown RBP18.6■□□□□ 0.57
LINC00472-203ENST00000426635 ANKIB1Q9P2G1 1089 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 ATP8A1Q9Y2Q0 1164 aa18.6■□□□□ 0.57
LINC00472-203ENST00000426635 PPFIA2O75334 1257 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms