RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 GPKOWQ92917 476 aaPredicted RBP eCLIP29.41■■■□□ 2.3
SMDT1-202ENST00000422252 MYH7BA7E2Y1 1941 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 MEIS2O14770 477 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 PPFIA4O75335 1185 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 F2P00734 622 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 RFC2P35250 354 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 PBX2P40425 430 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 MFSD10Q14728 455 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 HSDL1Q3SXM5 330 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 SYNE3Q6ZMZ3 975 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 DEFB128Q7Z7B8 93 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 RASEFQ8IZ41 740 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 C7orf31Q8N865 590 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 ZNF576Q9H609 170 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 MLXIPQ9HAP2 919 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 GTF2IRD1Q9UHL9 959 aa29.4■■■□□ 2.3
SMDT1-202ENST00000422252 HAS3O00219 553 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 IQCF3P0C7M6 154 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 EXOSC10Q01780 885 aaKnown RBP29.39■■■□□ 2.3
SMDT1-202ENST00000422252 KIAA0753Q2KHM9 967 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 DHX32Q7L7V1 743 aaKnown RBP29.39■■■□□ 2.3
SMDT1-202ENST00000422252 CCDC82Q8N4S0 544 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 CCDC155Q8N6L0 562 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 INPP4AQ96PE3 977 aaPredicted RBP29.39■■■□□ 2.3
SMDT1-202ENST00000422252 CTAGE1Q96RT6 745 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 ALG1Q9BT22 464 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 HDAC6Q9UBN7 1215 aa29.39■■■□□ 2.3
SMDT1-202ENST00000422252 ICAM3P32942 547 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 KRT32Q14532 448 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 RAB30Q15771 203 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 ADCK5Q3MIX3 580 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 APOA5Q6Q788 366 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 CAGE1Q8TC20 777 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 RTEL1Q9NZ71 1219 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 MSRAQ9UJ68 235 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 SLC4A7Q9Y6M7 1214 aa29.38■■■□□ 2.29
SMDT1-202ENST00000422252 hCG_1642624A0A1W2PR95 340 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 ZBBXA8MT70 800 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 GRIN2CQ14957 1233 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 PCNX4Q63HM2 1172 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 TCEANC2Q96MN5 208 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 PSTPIP2Q9H939 334 aa29.37■■■□□ 2.29
SMDT1-202ENST00000422252 SPATA31C2B4DYI2 1134 aa29.36■■■□□ 2.29
SMDT1-202ENST00000422252 FOSL2P15408 326 aa29.36■■■□□ 2.29
SMDT1-202ENST00000422252 XRRA1Q6P2D8 792 aa29.36■■■□□ 2.29
SMDT1-202ENST00000422252 RBM28Q9NW13 759 aaKnown RBP29.36■■■□□ 2.29
SMDT1-202ENST00000422252 TANC1Q9C0D5 1861 aa29.36■■■□□ 2.29
SMDT1-202ENST00000422252 SCN5AQ14524 2016 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 FIBPO43427 364 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 ACTN1P12814 892 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 NEDD9Q14511 834 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 AFAP1L1Q8TED9 768 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 CDH23Q9H251 3354 aa29.35■■■□□ 2.29
SMDT1-202ENST00000422252 SEMA3FQ13275 785 aa29.34■■■□□ 2.29
SMDT1-202ENST00000422252 MAFAQ8NHW3 353 aaPredicted RBP29.34■■■□□ 2.29
SMDT1-202ENST00000422252 DHX38Q92620 1227 aaKnown RBP29.34■■■□□ 2.29
SMDT1-202ENST00000422252 C16orf70Q9BSU1 422 aa29.34■■■□□ 2.29
SMDT1-202ENST00000422252 BCAS3Q9H6U6 928 aa29.34■■■□□ 2.29
SMDT1-202ENST00000422252 BRPF3Q9ULD4 1205 aa29.34■■■□□ 2.29
SMDT1-202ENST00000422252 NOP56O00567 594 aaKnown RBP29.33■■■□□ 2.29
SMDT1-202ENST00000422252 ZBTB43O43298 467 aa29.33■■■□□ 2.29
SMDT1-202ENST00000422252 HMGB1P09429 215 aaKnown RBP29.33■■■□□ 2.29
SMDT1-202ENST00000422252 RBL2Q08999 1139 aa29.33■■■□□ 2.29
SMDT1-202ENST00000422252 METTL7BQ6UX53 244 aa29.33■■■□□ 2.29
SMDT1-202ENST00000422252 CYFIP1Q7L576 1253 aa29.33■■■□□ 2.29
SMDT1-202ENST00000422252 HEATR3Q7Z4Q2 680 aa29.33■■■□□ 2.29
SMDT1-202ENST00000422252 FTOQ9C0B1 505 aaKnown RBP eCLIP29.33■■■□□ 2.296e-9■□□□□ 9.5
SMDT1-202ENST00000422252 CNTNAP5Q8WYK1 1306 aa29.32■■■□□ 2.28
SMDT1-202ENST00000422252 SELPP16109 830 aa29.32■■■□□ 2.28
SMDT1-202ENST00000422252 PTK7Q13308 1070 aa29.32■■■□□ 2.28
SMDT1-202ENST00000422252 RTN1Q16799 776 aa29.32■■■□□ 2.28
SMDT1-202ENST00000422252 NLRX1Q86UT6 975 aa29.32■■■□□ 2.28
SMDT1-202ENST00000422252 YBX2Q9Y2T7 364 aaKnown RBP29.32■■■□□ 2.28
SMDT1-202ENST00000422252 LGALS2P05162 132 aa29.31■■■□□ 2.28
SMDT1-202ENST00000422252 ATP2A2P16615 1042 aaKnown RBP29.31■■■□□ 2.28
SMDT1-202ENST00000422252 UBE2SQ16763 222 aa29.31■■■□□ 2.28
SMDT1-202ENST00000422252 LRRC8DQ7L1W4 858 aa29.31■■■□□ 2.28
SMDT1-202ENST00000422252 SENP7Q9BQF6 1050 aa29.31■■■□□ 2.28
SMDT1-202ENST00000422252 NKX2-4Q9H2Z4 354 aa29.31■■■□□ 2.28
SMDT1-202ENST00000422252 H3BRB1 525 aa29.3■■■□□ 2.28
SMDT1-202ENST00000422252 CKBP12277 381 aa29.3■■■□□ 2.28
SMDT1-202ENST00000422252 RABGGTBP53611 331 aa29.3■■■□□ 2.28
SMDT1-202ENST00000422252 KCNB2Q92953 911 aa29.3■■■□□ 2.28
SMDT1-202ENST00000422252 USP26Q9BXU7 913 aa29.3■■■□□ 2.28
SMDT1-202ENST00000422252 TUT1Q9H6E5 874 aaKnown RBP29.3■■■□□ 2.28
SMDT1-202ENST00000422252 TRIP12Q14669 1992 aaPredicted RBP29.3■■■□□ 2.28
SMDT1-202ENST00000422252 KLF18A0A0U1RQI7 1052 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 SPDYE3A6NKU9 549 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 GOLGA8AA7E2F4 631 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 GOLGA8BA8MQT2 603 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 PARNO95453 639 aaKnown RBP29.29■■■□□ 2.28
SMDT1-202ENST00000422252 ZNF200P98182 395 aaPredicted RBP29.29■■■□□ 2.28
SMDT1-202ENST00000422252 WWC2Q6AWC2 1192 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 GPRASP2Q96D09 838 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 GPR20Q99678 358 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 SLC28A3Q9HAS3 691 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 PCDHA11Q9Y5I1 949 aa29.29■■■□□ 2.28
SMDT1-202ENST00000422252 GBF1Q92538 1859 aa29.28■■■□□ 2.28
SMDT1-202ENST00000422252 HSPA4P34932 840 aa29.28■■■□□ 2.28
SMDT1-202ENST00000422252 RCAN1P53805 252 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms