RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CPSF3Q9UKF6 684 aaKnown RBP18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 COL5A2P05997 1499 aaPredicted RBP18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 CRCPO75575 148 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 BFSP2Q13515 415 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 TMEM47Q9BQJ4 181 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 LUC7L2Q9Y383 392 aaKnown RBP18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 HSPA4P34932 840 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 MEIS1O00470 390 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 KIF5AQ12840 1032 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 ZNF449Q6P9G9 518 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 MSTO1Q9BUK6 570 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 NELFBQ8WX92 580 aa18.57■□□□□ 0.56
SYNGAP1-202ENST00000418600 CPB1P15086 417 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 SFNP31947 248 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 FAM160A1Q05DH4 1040 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 CEP112Q8N8E3 955 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 RNF208Q9H0X6 261 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 STARD7Q9NQZ5 370 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 CGNQ9P2M7 1197 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 LONP1P36776 959 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 CDC42EP1Q00587 391 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 ZSWIM4Q9H7M6 989 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 FLT1P17948 1338 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 AKR1B1P15121 316 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 ERCC3P19447 782 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 CTTNQ14247 550 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 DGKDQ16760 1214 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 STRBPQ96SI9 672 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 DGKZQ13574 1117 aa18.56■□□□□ 0.56
SYNGAP1-202ENST00000418600 PDE6CP51160 858 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 INHBEP58166 350 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 CCDC77Q9BR77 488 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 C2orf40Q9H1Z8 148 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 K7ERI5 159 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 PFKFB2O60825 505 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 CCT6BQ92526 530 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 STAG3L1P0CL83 205 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 SLFN12LQ6IEE8 588 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 SWSAP1Q6NVH7 229 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 NOP9Q86U38 636 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 LRRC4Q9HBW1 653 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 JAK2O60674 1132 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 PRELPP51888 382 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 CUL4BQ13620 913 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 PCDHB4Q9Y5E5 795 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 ESPNB1AK53 854 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 HDLBPQ00341 1268 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 MYPNQ86TC9 1320 aa18.55■□□□□ 0.56
SYNGAP1-202ENST00000418600 PPP2R5DQ14738 602 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 PSPC1Q8WXF1 523 aaKnown RBP18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 TSGA10Q9BZW7 698 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 CTTNBP2NLQ9P2B4 639 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 SH2B2O14492 632 aaPredicted RBP18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 ERCC5P28715 1186 aaPredicted RBP18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 PAK2Q13177 524 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 DAAM2Q86T65 1068 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 TMEM39AQ9NV64 488 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 GDAQ9Y2T3 454 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 A0A1W2PRG0 241 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 MAPK6Q16659 721 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 FNDC3AQ9Y2H6 1198 aaKnown RBP18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 SYT1P21579 422 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 THNSL1Q8IYQ7 743 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 BANK1Q8NDB2 785 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 POLLQ9UGP5 575 aa18.54■□□□□ 0.56
SYNGAP1-202ENST00000418600 POLR3GO15318 223 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 PLCB4Q15147 1175 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 NCAPGQ9BPX3 1015 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 HMX1Q9NP08 348 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 ADGRF4Q8IZF3 695 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 STMN4Q9H169 189 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 MSRAQ9UJ68 235 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 SCN4BQ8IWT1 228 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 UBL4BQ8N7F7 174 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 RAG1P15918 1043 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 PARD3BQ8TEW8 1205 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 ZSWIM5Q9P217 1185 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 MYO1AQ9UBC5 1043 aa18.53■□□□□ 0.56
SYNGAP1-202ENST00000418600 KRT86O43790 486 aa18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 STAMQ92783 540 aa18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 NSUN4Q96CB9 384 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 VPS16Q9H269 839 aa18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 EVI5O60447 810 aa18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 GABBR1Q9UBS5 961 aa18.52■□□□□ 0.56
SYNGAP1-202ENST00000418600 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms