RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SMOC1Q9H4F8 434 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 LUC7LQ9NQ29 371 aaKnown RBP5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 TRIM13O60858 407 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 SASH1O94885 1247 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 CYP2C8P10632 490 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 RASA3Q14644 834 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 KIZQ2M2Z5 673 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 VMACQ2NL98 169 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 VWA3BQ502W6 1294 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 KCNT2Q6UVM3 1135 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 DEPDC7Q96QD5 511 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 CDC6Q99741 560 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 PDGFDQ9GZP0 370 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 SLC6A20Q9NP91 592 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
HMGB3P23-201ENST00000414981 KDM2BQ8NHM5 1336 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 TRBV23-1A0A0A0MS06 115 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 TCRBV5S2A0A599 114 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 KRIT1O00522 736 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM153BP0C7A2 387 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 CD300LDQ6UXZ3 194 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 MAMDC2Q7Z304 686 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 TRIM48Q8IWZ4 208 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 PTPRN2Q92932 1015 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 DHRS4Q9BTZ2 278 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 HSPBP1Q9NZL4 362 aa5.55□□□□□ -1.52
HMGB3P23-201ENST00000414981 CCDC163A0A0D9SF12 145 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 AQP7O14520 342 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 DIAPH1O60610 1272 aaKnown RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 C8BP07358 591 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 INHBBP09529 407 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 NKX3-2P78367 333 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 DLX2Q07687 328 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM209AQ5JX71 171 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 FOXB2Q5VYV0 432 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 TTLL7Q6ZT98 887 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 OTOP3Q7RTS5 596 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 SP8Q8IXZ3 490 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 JMYQ8N9B5 988 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 KYQ8NBH2 561 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 TOE1Q96GM8 510 aaKnown RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 C11orf84Q9BUA3 381 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 XYLT2Q9H1B5 865 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 SPATA6Q9NWH7 488 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 SNTG2Q9NY99 539 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 NUB1Q9Y5A7 615 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 PCDHB4Q9Y5E5 795 aa5.54□□□□□ -1.52
HMGB3P23-201ENST00000414981 BLACEA4D250 179 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM47E-STBD1D6RA91 191 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 NAT1P18440 290 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 HOXA5P20719 270 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 KCNC1P48547 511 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 SLURP1P55000 103 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 GABREP78334 506 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 SPIRE1Q08AE8 756 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 HABP4Q5JVS0 413 aaKnown RBP5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM26EQ8N5C1 309 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 ZNF526Q8TF50 670 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 SRPK1Q96SB4 655 aaKnown RBP5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 GORASP1Q9BQQ3 440 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 MYOTQ9UBF9 498 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 ASH2LQ9UBL3 628 aa5.53□□□□□ -1.52
HMGB3P23-201ENST00000414981 ASXL2Q76L83 1435 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 WNT9AO14904 365 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 SMARCA5O60264 1052 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 SOD2P04179 222 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 GRK2P25098 689 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 GRK3P35626 688 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 SARSP49591 514 aaKnown RBP5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 LILRA6Q6PI73 481 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 CARFQ8N187 725 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 TTLL11Q8NHH1 800 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 PIP4K2CQ8TBX8 421 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 KISS1RQ969F8 398 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 ZBTB8AQ96BR9 441 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 EXOC2Q96KP1 924 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 DRC1Q96MC2 740 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 YIPF4Q9BSR8 244 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 DTLQ9NZJ0 730 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 PPARGC1AQ9UBK2 798 aaKnown RBP5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 ADAMTS20P59510 1910 aa5.52□□□□□ -1.53
HMGB3P23-201ENST00000414981 LRG1P02750 347 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms