RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 F2P00734 622 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 FGBP02675 491 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 FGD1P98174 961 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 FUT2Q10981 343 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 HSDL1Q3SXM5 330 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 HEATR3Q7Z4Q2 680 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 RPUSD2Q8IZ73 545 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 HERVK_113Q902F9 699 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 JAKMIP1Q96N16 626 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 MLXIPQ9HAP2 919 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 NOD1Q9Y239 953 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 STXBP5LQ9Y2K9 1186 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 CNTNAP5Q8WYK1 1306 aa22.56■■□□□ 1.2
TSPAN4-209ENST00000409543 GOLGA8AA7E2F4 631 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 GOLGA8BA8MQT2 603 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 HAS3O00219 553 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 PITPNM1O00562 1244 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 FIBPO43427 364 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 EPB41L2O43491 1005 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 CPA1P15085 419 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 PSEN2P49810 448 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 ERICH6BQ5W0A0 696 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 BLOC1S2Q6QNY1 142 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 FAM217BQ9NTX9 383 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 PPP4R2Q9NY27 417 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 RTEL1Q9NZ71 1219 aa22.55■■□□□ 1.2
TSPAN4-209ENST00000409543 SORBS3O60504 671 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 ZNF286BP0CG31 522 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 SEMA3FQ13275 785 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 NEDD9Q14511 834 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 MFSD10Q14728 455 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 PTGISQ16647 500 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 TEX2Q8IWB9 1127 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 FBXL16Q8N461 479 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 C7orf31Q8N865 590 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 RETREG2Q8NC44 543 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 SCLYQ96I15 445 aa22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 MTIF3Q9H2K0 278 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 V9GY48 417 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-209ENST00000409543 TMEM265A0A087WTH1 108 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 PFKMP08237 780 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 BFSP2Q13515 415 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 KIAA0753Q2KHM9 967 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 WWC2Q6AWC2 1192 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 Q6ZUG5 572 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 NLRX1Q86UT6 975 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 VWCEQ96DN2 955 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 FAM161BQ96MY7 647 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 GUCD1Q96NT3 240 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 ALG1Q9BT22 464 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 SEMA6BQ9H3T3 888 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 HDAC6Q9UBN7 1215 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 GTF2IRD1Q9UHL9 959 aa22.53■■□□□ 1.2
TSPAN4-209ENST00000409543 CCDC196A0A1B0GTZ2 297 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 SPDYE3A6NKU9 549 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 RPS6KB1P23443 525 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 PSMA5P28066 241 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 CDC27P30260 824 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 RFC2P35250 354 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 APOBRQ0VD83 1088 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 UBE2SQ16763 222 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 PPP1R18Q6NYC8 613 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 METTL7BQ6UX53 244 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 BRF1Q92994 677 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 CTAGE1Q96RT6 745 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 SENP7Q9BQF6 1050 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 C16orf70Q9BSU1 422 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 BCAS3Q9H6U6 928 aa22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-209ENST00000409543 hCG_1984214I3L0E3 225 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 IQCF3P0C7M6 154 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 METAP2P50579 478 aaKnown RBP eCLIP22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 NAPAP54920 295 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 OTOP2Q7RTS6 562 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 CCDC155Q8N6L0 562 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 ZNF713Q8N859 430 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 CAGE1Q8TC20 777 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 AGXT2Q9BYV1 514 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 TTYH1Q9H313 450 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 CXXC1Q9P0U4 656 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 PCDHA6Q9UN73 950 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 PCDHA8Q9Y5H6 950 aa22.51■■□□□ 1.19
TSPAN4-209ENST00000409543 NOP56O00567 594 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 DNAJB2P25686 324 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 ADD1P35611 737 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 TYW1BQ6NUM6 668 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 CYFIP1Q7L576 1253 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 GIMAP8Q8ND71 665 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 GPRASP2Q96D09 838 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 CDHR1Q96JP9 859 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 RIC8AQ9NPQ8 531 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 BARHL2Q9NY43 387 aa22.5■■□□□ 1.19
TSPAN4-209ENST00000409543 COL6A3P12111 3177 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 STXBP3O00186 592 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 RBL2Q08999 1139 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 GPR20Q99678 358 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 USP26Q9BXU7 913 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 EHMT1Q9H9B1 1298 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 UBIAD1Q9Y5Z9 338 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms