RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MRVI1Q9Y6F6 885 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 ABCB11O95342 1321 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 KIAA1217Q5T5P2 1943 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 C19orf67A6NJJ6 358 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 SORBS3O60504 671 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 UPP2O95045 317 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
CHMP3-203ENST00000409225 LAMC2Q13753 1193 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 ALX1Q15699 326 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 CDC37Q16543 378 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-203ENST00000409225 ARHGEF16Q5VV41 709 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 TMEM192Q8IY95 271 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 MIER1Q8N108 512 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 IWS1Q96ST2 819 aa19.53■□□□□ 0.72
CHMP3-203ENST00000409225 IRS1P35568 1242 aa19.52■□□□□ 0.72
CHMP3-203ENST00000409225 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
CHMP3-203ENST00000409225 RPAINQ86UA6 219 aa19.52■□□□□ 0.72
CHMP3-203ENST00000409225 FGAP02671 866 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 HAND2P61296 217 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 COL19A1Q14993 1142 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 CLUL1Q15846 466 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 PLEKHG4Q58EX7 1191 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 SNX27Q96L92 541 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 TTC14Q96N46 770 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 UPF3BQ9BZI7 483 aaKnown RBP19.51■□□□□ 0.71
CHMP3-203ENST00000409225 WDFY4Q6ZS81 3184 aa19.51■□□□□ 0.71
CHMP3-203ENST00000409225 EIF3JO75822 258 aaKnown RBP19.5■□□□□ 0.71
CHMP3-203ENST00000409225 MX1P20591 662 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 SERINC5Q86VE9 423 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 MCF2L2Q86YR7 1114 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 SEPT8Q92599 483 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 TOP1MTQ969P6 601 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 MFSD14AQ96MC6 490 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 MAF1Q9H063 256 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 MUTYHQ9UIF7 546 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
CHMP3-203ENST00000409225 ZNF318Q5VUA4 2279 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 NR3C2P08235 984 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 CTSHP09668 335 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 LTBRP36941 435 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 ADGRF4Q8IZF3 695 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 SPATA33Q96N06 139 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 PHOX2BQ99453 314 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 ZKSCAN3Q9BRR0 538 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 OSBPL7Q9BZF2 842 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 PXMP2Q9NR77 195 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 HELLSQ9NRZ9 838 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 MYH7BA7E2Y1 1941 aa19.49■□□□□ 0.71
CHMP3-203ENST00000409225 NLRC5Q86WI3 1866 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 C17orf102A2RUQ5 167 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 PPFIA4O75335 1185 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 MYCLP12524 364 aaPredicted RBP19.48■□□□□ 0.71
CHMP3-203ENST00000409225 HOXD8P13378 290 aaPredicted RBP19.48■□□□□ 0.71
CHMP3-203ENST00000409225 CTNNB1P35222 781 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 QRICH1Q2TAL8 776 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 HSDL1Q3SXM5 330 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 MYSM1Q5VVJ2 828 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 MFSD6Q6ZSS7 791 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 ATP6V0A1Q93050 837 aa19.48■□□□□ 0.71
CHMP3-203ENST00000409225 IFIH1Q9BYX4 1025 aaKnown RBP19.48■□□□□ 0.71
CHMP3-203ENST00000409225 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
CHMP3-203ENST00000409225 MYO7AQ13402 2215 aa19.47■□□□□ 0.71
CHMP3-203ENST00000409225 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.47■□□□□ 0.71
CHMP3-203ENST00000409225 DHX16O60231 1041 aaKnown RBP19.47■□□□□ 0.71
CHMP3-203ENST00000409225 GGPS1O95749 300 aa19.47■□□□□ 0.71
CHMP3-203ENST00000409225 CFBP00751 764 aa19.47■□□□□ 0.71
CHMP3-203ENST00000409225 SMAD2Q15796 467 aaKnown RBP19.47■□□□□ 0.71
CHMP3-203ENST00000409225 CELF3Q5SZQ8 465 aaKnown RBP19.47■□□□□ 0.71
CHMP3-203ENST00000409225 TBC1D10CQ8IV04 446 aa19.47■□□□□ 0.71
CHMP3-203ENST00000409225 FAM227BQ96M60 508 aa19.47■□□□□ 0.71
CHMP3-203ENST00000409225 A0A0D9SFI3 127 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 TREHO43280 583 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 NCK2O43639 380 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 CSPG5O95196 566 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 HSPD1P10809 573 aaKnown RBP19.46■□□□□ 0.71
CHMP3-203ENST00000409225 DLX2Q07687 328 aaPredicted RBP19.46■□□□□ 0.71
CHMP3-203ENST00000409225 FIBCD1Q8N539 461 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 POP1Q99575 1024 aaKnown RBP19.46■□□□□ 0.71
CHMP3-203ENST00000409225 C16orf70Q9BSU1 422 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 VAT1LQ9HCJ6 419 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 COL4A6Q14031 1691 aa19.46■□□□□ 0.71
CHMP3-203ENST00000409225 MBTPS2O43462 519 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 RGS20O76081 388 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 SMIM10L2AP0DMW4 78 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 SMIM10L2BP0DMW5 78 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 HYAL1Q12794 435 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 CTC1Q2NKJ3 1217 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 MCMDC2Q4G0Z9 681 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 HERC4Q5GLZ8 1057 aaPredicted RBP19.45■□□□□ 0.7
CHMP3-203ENST00000409225 RNF135Q8IUD6 432 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 PNMA1Q8ND90 353 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 PRSS33Q8NF86 280 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 EVI5LQ96CN4 794 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 IL17RAQ96F46 866 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 IGFLR1Q9H665 355 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 ZMYM6O95789 1325 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 NEDD4P46934 1319 aa19.45■□□□□ 0.7
CHMP3-203ENST00000409225 RALGAPA2Q2PPJ7 1873 aa19.44■□□□□ 0.7
CHMP3-203ENST00000409225 GRM6O15303 877 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms