RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 SPATA31C2B4DYI2 1134 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 MAFGO15525 162 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 NLRP5P59047 1200 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 PURAQ00577 322 aaKnown RBP23.8■■□□□ 1.4
PDGFA-204ENST00000405692 RABEP1Q15276 862 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 GIMAP8Q8ND71 665 aaPredicted RBP23.8■■□□□ 1.4
PDGFA-204ENST00000405692 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 ZFP91Q96JP5 570 aaPredicted RBP23.8■■□□□ 1.4
PDGFA-204ENST00000405692 MTG1Q9BT17 334 aaPredicted RBP23.8■■□□□ 1.4
PDGFA-204ENST00000405692 MLXIPQ9HAP2 919 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 VPS54Q9P1Q0 977 aa23.8■■□□□ 1.4
PDGFA-204ENST00000405692 MKI67P46013 3256 aaKnown RBP23.79■■□□□ 1.4
PDGFA-204ENST00000405692 ARVCFO00192 962 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 GGPS1O95749 300 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 DGKDQ16760 1214 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 CELF3Q5SZQ8 465 aaKnown RBP23.79■■□□□ 1.4
PDGFA-204ENST00000405692 GALNT17Q6IS24 598 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 ANKRD33Q7Z3H0 272 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 PPTC7Q8NI37 304 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 AFG1LQ8WV93 481 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 ZSCAN31Q96LW9 406 aaPredicted RBP23.79■■□□□ 1.4
PDGFA-204ENST00000405692 KIF2CQ99661 725 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 SENP7Q9BQF6 1050 aa23.79■■□□□ 1.4
PDGFA-204ENST00000405692 TLR3O15455 904 aaKnown RBP23.78■■□□□ 1.4
PDGFA-204ENST00000405692 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
PDGFA-204ENST00000405692 MMP3P08254 477 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 UBA1P22314 1058 aaKnown RBP23.78■■□□□ 1.4
PDGFA-204ENST00000405692 SREBF1P36956 1147 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 TLE2Q04725 743 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 ITGA7Q13683 1181 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 MYSM1Q5VVJ2 828 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 JAKMIP3Q5VZ66 844 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 TMEM260Q9NX78 707 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 ZMYND8Q9ULU4 1186 aaPredicted RBP23.78■■□□□ 1.4
PDGFA-204ENST00000405692 UBIAD1Q9Y5Z9 338 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 ALPK3Q96L96 1907 aa23.78■■□□□ 1.4
PDGFA-204ENST00000405692 ZNF76P36508 570 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 CDK7P50613 346 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 MTMR1Q13613 665 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 NECAB1Q8N987 351 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 SPATA33Q96N06 139 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 JADE2Q9NQC1 790 aa23.77■■□□□ 1.4
PDGFA-204ENST00000405692 ST18O60284 1047 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 PPFIA4O75335 1185 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 CLTBP09497 229 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 SYN1P17600 705 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 SP2Q02086 613 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 METTL7BQ6UX53 244 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 SLC43A3Q8NBI5 491 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 PGBD1Q96JS3 809 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 MXRA8Q9BRK3 442 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 PRDM5Q9NQX1 630 aaPredicted RBP23.76■■□□□ 1.39
PDGFA-204ENST00000405692 SH2B1Q9NRF2 756 aaPredicted RBP23.76■■□□□ 1.39
PDGFA-204ENST00000405692 ORC3Q9UBD5 711 aaPredicted RBP23.76■■□□□ 1.39
PDGFA-204ENST00000405692 PCDHA4Q9UN74 947 aa23.76■■□□□ 1.39
PDGFA-204ENST00000405692 NOP56O00567 594 aaKnown RBP23.75■■□□□ 1.39
PDGFA-204ENST00000405692 ITGB5P18084 799 aa23.75■■□□□ 1.39
PDGFA-204ENST00000405692 ARHGAP4P98171 946 aa23.75■■□□□ 1.39
PDGFA-204ENST00000405692 CEP55Q53EZ4 464 aa23.75■■□□□ 1.39
PDGFA-204ENST00000405692 LBHD1Q9BQE6 289 aaPredicted RBP23.75■■□□□ 1.39
PDGFA-204ENST00000405692 KATNAL1Q9BW62 490 aa23.75■■□□□ 1.39
PDGFA-204ENST00000405692 LARGE1O95461 756 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 CTDNEP1O95476 244 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 CYP3A4P08684 503 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 SEMA3FQ13275 785 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 CYFIP1Q7L576 1253 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 BLIDQ8IZY5 108 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 DAGLBQ8NCG7 672 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 TBC1D32Q96NH3 1257 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
PDGFA-204ENST00000405692 PSMC6P62333 389 aa23.73■■□□□ 1.39
PDGFA-204ENST00000405692 PTPN11Q06124 597 aaPredicted RBP23.73■■□□□ 1.39
PDGFA-204ENST00000405692 HSDL1Q3SXM5 330 aa23.73■■□□□ 1.39
PDGFA-204ENST00000405692 NIPA1Q7RTP0 329 aa23.73■■□□□ 1.39
PDGFA-204ENST00000405692 TMEM39AQ9NV64 488 aa23.73■■□□□ 1.39
PDGFA-204ENST00000405692 HOXD8P13378 290 aaPredicted RBP23.72■■□□□ 1.39
PDGFA-204ENST00000405692 FAAP100Q0VG06 881 aa23.72■■□□□ 1.39
PDGFA-204ENST00000405692 NFRKBQ6P4R8 1299 aa23.72■■□□□ 1.39
PDGFA-204ENST00000405692 FAM126BQ8IXS8 530 aa23.72■■□□□ 1.39
PDGFA-204ENST00000405692 NSUN7Q8NE18 718 aaKnown RBP23.72■■□□□ 1.39
PDGFA-204ENST00000405692 LLPHQ9BRT6 129 aaKnown RBP23.72■■□□□ 1.39
PDGFA-204ENST00000405692 ALG1Q9BT22 464 aa23.72■■□□□ 1.39
PDGFA-204ENST00000405692 BACH2Q9BYV9 841 aa23.72■■□□□ 1.39
PDGFA-204ENST00000405692 GRIN2DO15399 1336 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 MEIS1O00470 390 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 KIAA0355O15063 1070 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 SORBS3O60504 671 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 SUPT20HL2P0C7V6 817 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 NBPF20Q3BBV1 942 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 RASGRP4Q8TDF6 673 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 AIFM3Q96NN9 605 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 KCNH7Q9NS40 1196 aa23.71■■□□□ 1.39
PDGFA-204ENST00000405692 RAG1P15918 1043 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 KCNA2P16389 499 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 MCM2P49736 904 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 USP11P51784 963 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 SETQ01105 290 aaPredicted RBP23.7■■□□□ 1.38
PDGFA-204ENST00000405692 FAM47CQ5HY64 1035 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 CHRDL2Q6WN34 429 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 CRYGNQ8WXF5 182 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms