RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NONOQ15233 471 aaKnown RBP eCLIP21.14■□□□□ 0.98
CCDC50-202ENST00000392456 KRT25Q7Z3Z0 450 aa21.14■□□□□ 0.98
CCDC50-202ENST00000392456 PRPF38AQ8NAV1 312 aaKnown RBP21.14■□□□□ 0.98
CCDC50-202ENST00000392456 SYKP43405 635 aa21.14■□□□□ 0.97
CCDC50-202ENST00000392456 SCYL3Q8IZE3 742 aa21.14■□□□□ 0.97
CCDC50-202ENST00000392456 KCNH3Q9ULD8 1083 aa21.14■□□□□ 0.97
CCDC50-202ENST00000392456 FAM237AA0A1B0GTK4 181 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 OPLAHO14841 1288 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 PTPRAP18433 802 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 RWDD2BP57060 319 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 TRAF1Q13077 416 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 FBXO11Q86XK2 927 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 AMNQ9BXJ7 453 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 EMILIN3Q9NT22 766 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 USP2O75604 605 aaPredicted RBP21.13■□□□□ 0.97
CCDC50-202ENST00000392456 PPP1R18Q6NYC8 613 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 CCDC174Q6PII3 467 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 GPR161Q8N6U8 529 aaKnown RBP21.13■□□□□ 0.97
CCDC50-202ENST00000392456 CUL5Q93034 780 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
CCDC50-202ENST00000392456 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 KIAA1683Q9H0B3 1180 aa21.13■□□□□ 0.97
CCDC50-202ENST00000392456 A0A087X0B3 334 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 CCNT1O60563 726 aaKnown RBP21.12■□□□□ 0.97
CCDC50-202ENST00000392456 CDC25AP30304 524 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 PDILTQ8N807 584 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 DCPSQ96C86 337 aaKnown RBP21.12■□□□□ 0.97
CCDC50-202ENST00000392456 THOC1Q96FV9 657 aaKnown RBP21.12■□□□□ 0.97
CCDC50-202ENST00000392456 PPP1R13BQ96KQ4 1090 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 ZHX2Q9Y6X8 837 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 PITPNM2Q9BZ72 1349 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 POTECB2RU33 542 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 MEIS2O14770 477 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 EPHX2P34913 555 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 NF2P35240 595 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 MRPL12P52815 198 aaKnown RBP21.12■□□□□ 0.97
CCDC50-202ENST00000392456 PREPLQ4J6C6 727 aaPredicted RBP21.12■□□□□ 0.97
CCDC50-202ENST00000392456 EPC1Q9H2F5 836 aa21.12■□□□□ 0.97
CCDC50-202ENST00000392456 GLTPD2A6NH11 291 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 KRT26Q7Z3Y9 468 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 NEK8Q86SG6 692 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 ZNF579Q8NAF0 562 aaKnown RBP21.11■□□□□ 0.97
CCDC50-202ENST00000392456 PLEKHA4Q9H4M7 779 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 PPP2R3BQ9Y5P8 575 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 EME2A4GXA9 379 aaPredicted RBP21.11■□□□□ 0.97
CCDC50-202ENST00000392456 FOXN1O15353 648 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 E4F1Q66K89 784 aaPredicted RBP21.11■□□□□ 0.97
CCDC50-202ENST00000392456 SULF1Q8IWU6 871 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 KLHL23Q8NBE8 558 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 TBC1D5Q92609 795 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 SYMPKQ92797 1274 aaKnown RBP21.11■□□□□ 0.97
CCDC50-202ENST00000392456 MRFAP1L1Q96HT8 127 aa21.11■□□□□ 0.97
CCDC50-202ENST00000392456 CPSF2Q9P2I0 782 aaKnown RBP21.11■□□□□ 0.97
CCDC50-202ENST00000392456 POLR2DO15514 142 aaKnown RBP21.1■□□□□ 0.97
CCDC50-202ENST00000392456 ZNF165P49910 485 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 LONRF2Q1L5Z9 754 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 SUPT20HL1Q3ZLR7 823 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 SARM1Q6SZW1 724 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 ARMC2Q8NEN0 867 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 CHURC1Q8WUH1 139 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 BAG1Q99933 345 aaPredicted RBP21.1■□□□□ 0.97
CCDC50-202ENST00000392456 PDE11AQ9HCR9 933 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 TMCO5BA8MYB1 307 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 TDP2O95551 362 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 BMP15O95972 392 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 VCAM1P19320 739 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCDC50-202ENST00000392456 RANBP17Q9H2T7 1088 aaKnown RBP21.1■□□□□ 0.97
CCDC50-202ENST00000392456 PICK1Q9NRD5 415 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 SPATS2LQ9NUQ6 558 aaKnown RBP21.1■□□□□ 0.97
CCDC50-202ENST00000392456 FAN1Q9Y2M0 1017 aa21.1■□□□□ 0.97
CCDC50-202ENST00000392456 PHLPP2Q6ZVD8 1323 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 HOXA13P31271 388 aaPredicted RBP21.09■□□□□ 0.97
CCDC50-202ENST00000392456 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.09■□□□□ 0.97
CCDC50-202ENST00000392456 MOB2Q70IA6 237 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 MSL3Q8N5Y2 521 aaKnown RBP21.09■□□□□ 0.97
CCDC50-202ENST00000392456 FERMT2Q96AC1 680 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 CARD6Q9BX69 1037 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 FEM1BQ9UK73 627 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 BACE1P56817 501 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 ZNF280CQ8ND82 737 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 HOOK2Q96ED9 719 aa21.09■□□□□ 0.97
CCDC50-202ENST00000392456 PP2D1A8MPX8 630 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 SLC37A4O43826 429 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 POTEIP0CG38 1075 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 POTEJP0CG39 1038 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 EAPPQ56P03 285 aaPredicted RBP21.08■□□□□ 0.97
CCDC50-202ENST00000392456 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 GINM1Q9NU53 330 aa21.08■□□□□ 0.97
CCDC50-202ENST00000392456 GRIN3BO60391 1043 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 ECM2O94769 699 aaPredicted RBP21.07■□□□□ 0.96
CCDC50-202ENST00000392456 HMGCS2P54868 508 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 CABS1Q96KC9 395 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 AGBL1Q96MI9 1066 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 DNAJC25Q9H1X3 360 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 SERTAD1Q9UHV2 236 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 PLA2G6O60733 806 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms