RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CEP170BQ9Y4F5 1589 aaPredicted RBP21.41■■□□□ 1.02
SHANK1-203ENST00000391813 CFAP73A6NFT4 308 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 SLC7A5Q01650 507 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 TCP10Q12799 353 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 ABHD10Q9NUJ1 306 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 TECP42680 631 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 CYP27A1Q02318 531 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 ADAT2Q7Z6V5 191 aaKnown RBP21.41■■□□□ 1.02
SHANK1-203ENST00000391813 EPSTI1Q96J88 318 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 BATF3Q9NR55 127 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 PANK4Q9NVE7 773 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 PLAAQ9Y263 795 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 CCZ1BP86790 482 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 CCZ1P86791 482 aaPredicted RBP21.41■■□□□ 1.02
SHANK1-203ENST00000391813 ARMCX5Q6P1M9 558 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 KIAA0825Q8IV33 1275 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 MB21D1Q8N884 522 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 MEFVO15553 781 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 VPS41P49754 854 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 E4F1Q66K89 784 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 PARP9Q8IXQ6 854 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 CMTR1Q8N1G2 835 aaKnown RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 CHURC1Q8WUH1 139 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 BIN2Q9UBW5 565 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 ANGPTL2Q9UKU9 493 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 ATF5Q9Y2D1 282 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 DNAJC8O75937 253 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 ARHGAP4P98171 946 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 GRAPQ13588 217 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 GRAMD1CQ8IYS0 662 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 GRAPLQ8TC17 118 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 MADDQ8WXG6 1647 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 TRIM66O15016 1216 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 SERPING1P05155 500 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 BCAMP50895 628 aa21.4■■□□□ 1.02
SHANK1-203ENST00000391813 DHX40Q8IX18 779 aaKnown RBP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 DKC1O60832 514 aaKnown RBP eCLIP21.4■■□□□ 1.02
SHANK1-203ENST00000391813 LOC102724159A0A0B4J2E5 919 aa21.39■■□□□ 1.02
SHANK1-203ENST00000391813 PWP2Q15269 919 aaKnown RBP21.39■■□□□ 1.02
SHANK1-203ENST00000391813 TXNRD1Q16881 649 aa21.39■■□□□ 1.02
SHANK1-203ENST00000391813 ZNF579Q8NAF0 562 aaKnown RBP21.39■■□□□ 1.02
SHANK1-203ENST00000391813 ZMYND12Q9H0C1 365 aa21.39■■□□□ 1.02
SHANK1-203ENST00000391813 RAB20Q9NX57 234 aa21.39■■□□□ 1.02
SHANK1-203ENST00000391813 SNX16P57768 344 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 DYNC1I2Q13409 638 aaKnown RBP21.39■■□□□ 1.01
SHANK1-203ENST00000391813 ALDH8A1Q9H2A2 487 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-203ENST00000391813 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 ZBTB22O15209 634 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 FTCDO95954 541 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 SERPINB6P35237 376 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 KCNQ4P56696 695 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 TOB2Q14106 344 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-203ENST00000391813 PTPROQ16827 1216 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 LRRC24Q50LG9 513 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 NLRP14Q86W24 1093 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 HVCN1Q96D96 273 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 PAGE5Q96GU1 130 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 SH3GL3Q99963 347 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 IRX1P78414 480 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-203ENST00000391813 RSAD2Q8WXG1 361 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 FAM212AQ96EL1 285 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 CENPKQ9BS16 269 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.39■■□□□ 1.01
SHANK1-203ENST00000391813 SLC24A3Q9HC58 644 aa21.39■■□□□ 1.01
SHANK1-203ENST00000391813 PTPREP23469 700 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
SHANK1-203ENST00000391813 MAPK13O15264 365 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 IQCB1Q15051 598 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 GEN1Q17RS7 908 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 ST7Q9NRC1 585 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 PIM2Q9P1W9 311 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 STOML1Q9UBI4 398 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 ZNF710Q8N1W2 664 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 PSMD1Q99460 953 aa21.38■■□□□ 1.01
SHANK1-203ENST00000391813 ELAC2Q9BQ52 826 aaKnown RBP21.38■■□□□ 1.01
SHANK1-203ENST00000391813 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
SHANK1-203ENST00000391813 TMEM232C9JQI7 657 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 MMEP08473 750 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 LIFRP42702 1097 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 CCT6BQ92526 530 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 COL4A3BPQ9Y5P4 624 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 NUGGCQ68CJ6 796 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 CAPRIN2Q6IMN6 1127 aaKnown RBP21.37■■□□□ 1.01
SHANK1-203ENST00000391813 EEF2KMTQ96G04 330 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 EPC1Q9H2F5 836 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 GOLPH3LQ9H4A5 285 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 PTPRUQ92729 1446 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 ECEL1O95672 775 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 DIXDC1Q155Q3 683 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 BARGINQ6ZT62 677 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 ST13P4Q8IZP2 240 aaPredicted RBP21.37■■□□□ 1.01
SHANK1-203ENST00000391813 NLRP7Q8WX94 980 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 SLC5A4Q9NY91 659 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 CREB3O43889 395 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 DCTN3O75935 186 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 ACTN3Q08043 901 aaPredicted RBP21.37■■□□□ 1.01
SHANK1-203ENST00000391813 DPH6Q7L8W6 267 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 ZBTB21Q9ULJ3 1066 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms