RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SERPINB13Q9UIV8 391 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PCDHB4Q9Y5E5 795 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 GOLGA4Q13439 2230 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 CLTCL1P53675 1640 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEB3A0JP26 581 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTECB2RU33 542 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PLA2G4BP0C869 781 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POLD1P28340 1107 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CDO1Q16878 200 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 MTERF2Q49AM1 385 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TBC1D9BQ66K14 1250 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEBQ6S5H4 581 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 LZTS2Q9BRK4 669 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 EFCC1Q9HA90 598 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 METTL14Q9HCE5 456 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 EMILIN3Q9NT22 766 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POLR1AO95602 1720 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEFA5A3E0 1075 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PALMO75781 387 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEIP0CG38 1075 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 SRGAP2CP0DJJ0 459 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 KLK7P49862 253 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PDE6CP51160 858 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 NNTQ13423 1086 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 KRT81Q14533 505 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 FYB2Q5VWT5 728 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 RESP18Q5W5W9 173 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEGQ6S5H5 508 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POTEEQ6S8J3 1075 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 SYCE1Q8N0S2 351 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 DDX12PQ92771 950 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 NDST4Q9H3R1 872 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 LRRC7Q96NW7 1537 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CRCPO75575 148 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TDP2O95551 362 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TTLL1O95922 423 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TUBBP07437 444 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 IL6STP40189 918 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 TFAMQ00059 246 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 PPP2R5BQ15173 497 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TMED2Q15363 201 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 ANKRD20A3Q5VUR7 823 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 NME8Q8N427 588 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TRIML1Q8N9V2 468 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CCDC51Q96ER9 411 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 RMDN2Q96LZ7 410 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 C1orf112Q9NSG2 853 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TTC7AQ9ULT0 858 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 EXOC7Q9UPT5 735 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 ATF5Q9Y2D1 282 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 PABPN1LA6NDY0 278 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 USP17L10C9JJH3 530 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 INO80B-WBP1J3KQ70 363 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PPEF1O14829 653 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 IKBKBO14920 756 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CTNND1O60716 968 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 YWHAGP61981 247 aaKnown RBP eCLIP5.44□□□□□ -1.54
LTN1-202ENST00000389194 C4orf50Q6ZRC1 276 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TAOK1Q7L7X3 1001 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 SREK1Q8WXA9 508 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 INO80BQ9C086 356 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 SH2D4AQ9H788 454 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TDRD3Q9H7E2 651 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 STK32BQ9NY57 414 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 MFAP3LO75121 409 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 GH2P01242 217 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TCP1P17987 556 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 CNGA1P29973 690 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 ZNF449Q6P9G9 518 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 MB21D1Q8N884 522 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 ENOX1Q8TC92 643 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 TBC1D22AQ8WUA7 517 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 JPH2Q9BR39 696 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 CARD10Q9BWT7 1032 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 RAB17Q9H0T7 212 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 SWAP70Q9UH65 585 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 MINPP1Q9UNW1 487 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 COL4A3BPQ9Y5P4 624 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TTC26A0AVF1 554 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 LRRC53A6NM62 1247 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PIK3R2O00459 728 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 GGCXP38435 758 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PPP1R2P41236 205 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 FOXO4P98177 505 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 ITKQ08881 620 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 DMP1Q13316 513 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 CCDC38Q502W7 563 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 LMBRD2Q68DH5 695 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 DNAAF5Q86Y56 855 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PRPF38AQ8NAV1 312 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 HIPK4Q8NE63 616 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TMEM47Q9BQJ4 181 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 SNX24Q9Y343 169 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 BZW2Q9Y6E2 419 aaKnown RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 IVNS1ABPQ9Y6Y0 642 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 EFCAB6Q5THR3 1501 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TRPM1Q7Z4N2 1603 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 GSG1L2A8MUP6 293 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 H7C0C1 242 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms