RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 CAPN2P17655 700 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 DACT2Q5SW24 774 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 CNNM4Q6P4Q7 775 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 POTEAQ6S8J7 498 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 MLXIPQ9HAP2 919 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 ABCB11O95342 1321 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 H7C1D1 291 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 NCK2O43639 380 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 RASSF7Q02833 373 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 DNAJC21Q5F1R6 531 aaKnown RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 IRF2BP1Q8IU81 584 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 CNKSR1Q969H4 720 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 TSG101Q99816 390 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 TBCAO75347 108 aaKnown RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 MED24O75448 989 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 FLOT1O75955 427 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 HOXA10P31260 410 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 CLCN6P51797 869 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 ADAM9Q13443 819 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 PNMA5Q96PV4 448 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 SPAG5Q96R06 1193 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 HYOU1Q9Y4L1 999 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 FAM86B1E9PN63 330 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 FAM86B2P0C5J1 330 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 MMP14P50281 582 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 TRIM65Q6PJ69 517 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 CYP26C1Q6V0L0 522 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 PHLDB2Q86SQ0 1253 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 LACRTQ9GZZ8 138 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 GEMIN8Q9NWZ8 242 aaKnown RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 CCP110O43303 1012 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 RCAN1P53805 252 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 GFPT1Q06210 699 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 SF3A3Q12874 501 aaKnown RBP eCLIP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 ARHGAP44Q17R89 818 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 MYOCDQ8IZQ8 938 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 P2RX7Q99572 595 aaKnown RBP11.97□□□□□ -0.49
CXCL12-203ENST00000374429 MTA3Q9BTC8 594 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 CENPHQ9H3R5 247 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 BLOC1S4Q9NUP1 217 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
CXCL12-203ENST00000374429 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
CXCL12-203ENST00000374429 NMT1P30419 496 aaKnown RBP11.96□□□□□ -0.49
CXCL12-203ENST00000374429 CASP5P51878 434 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 STAT2P52630 851 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 GABPB1Q06547 395 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-203ENST00000374429 SPAG1Q07617 926 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 SH3RF1Q7Z6J0 888 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 SFR1Q86XK3 245 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 HAS1Q92839 578 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-203ENST00000374429 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
CXCL12-203ENST00000374429 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 NHSL1Q5SYE7 1610 aa11.96□□□□□ -0.49
CXCL12-203ENST00000374429 NDUFA10O95299 355 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 MOCS3O95396 460 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 NR2F2P24468 414 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 SLC7A5Q01650 507 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.5
CXCL12-203ENST00000374429 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 FAM133AQ8N9E0 248 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 NEK11Q8NG66 645 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 JAKMIP2Q96AA8 810 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 ARGLU1Q9NWB6 273 aaPredicted RBP11.96□□□□□ -0.5
CXCL12-203ENST00000374429 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.5
CXCL12-203ENST00000374429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.96□□□□□ -0.5
CXCL12-203ENST00000374429 KLRC4O43908 158 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 GAS7O60861 476 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 CCNE1P24864 410 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 COASYQ13057 564 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 PRPF4BQ13523 1007 aaKnown RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 RASA3Q14644 834 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 STRIP1Q5VSL9 837 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 NHEJ1Q9H9Q4 299 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 ADAMTS1Q9UHI8 967 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 BRCA2P51587 3418 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 GOLGA8IPA6NC78 632 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 GOLGA8JA6NMD2 632 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 FAM13AO94988 1023 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 ABCB4P21439 1286 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms