RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 GUCA1BQ9UMX6 200 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 A0A1W2PQC6 194 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 NDUFA10O95299 355 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 PLA2G4BP0C869 781 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 ARHGAP25P42331 645 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 DLGAP5Q15398 846 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 ZNF70Q9UC06 446 aaPredicted RBP17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 COL4A5P29400 1685 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 DPEP1P16444 411 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 GLIS2Q9BZE0 524 aaPredicted RBP17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 ZNF446Q9NWS9 450 aa17.78■□□□□ 0.44
CNKSR1-202ENST00000374253 SHTN1A0MZ66 631 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 CFBP00751 764 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 KIF4BQ2VIQ3 1234 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 FAM114A1Q8IWE2 563 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 DNAJC7Q99615 494 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 ATRNL1Q5VV63 1379 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 KRT18P05783 430 aaKnown RBP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 PLEKP08567 350 aaPredicted RBP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 USP11P51784 963 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 PABPC4Q13310 644 aaKnown RBP eCLIP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 TSR1Q2NL82 804 aaKnown RBP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 TTYH3Q9C0H2 523 aa17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
CNKSR1-202ENST00000374253 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 CLCN6P51797 869 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 CYP27A1Q02318 531 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 FAM26FQ5R3K3 315 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 CATSPER3Q86XQ3 398 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 OGFOD1Q8N543 542 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 LENG9Q96B70 501 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 MMRN2Q9H8L6 949 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 ZNF76P36508 570 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 EHHADHQ08426 723 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 FKBP15Q5T1M5 1219 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 MYOCDQ8IZQ8 938 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 NDST4Q9H3R1 872 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 FBXO28Q9NVF7 368 aa17.76■□□□□ 0.43
CNKSR1-202ENST00000374253 TRAF5O00463 557 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 STAT2P52630 851 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 HERVK_113P62684 666 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 VWA3BQ502W6 1294 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 LRRC55Q6ZSA7 311 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 SMCR8Q8TEV9 937 aaPredicted RBP17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 CRYGNQ8WXF5 182 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 ENC1O14682 589 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 MSH4O15457 936 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 CYP11B2P19099 503 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 SPIRE1Q08AE8 756 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 AP3B2Q13367 1082 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 ARSHQ5FYA8 562 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 ZBTB21Q9ULJ3 1066 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
CNKSR1-202ENST00000374253 CYP3A7-CYP3A51PA0A087WV96 503 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 EFCAB8A8MWE9 144 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 CHMP2AO43633 222 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 SEC31AO94979 1220 aaKnown RBP17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 CYP3A7P24462 503 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 APBA1Q02410 837 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 KDM3AQ9Y4C1 1321 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 CASP5P51878 434 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 NBPF9Q3BBW0 867 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 KRT26Q7Z3Y9 468 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 ARHGEF10LQ9HCE6 1279 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 DUSP10Q9Y6W6 482 aa17.74■□□□□ 0.43
CNKSR1-202ENST00000374253 CTAGE9A4FU28 777 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 KCNA3P22001 575 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 PPP1R2P41236 205 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 COBLL1Q53SF7 1204 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 SLFN12Q8IYM2 578 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 GMLQ99445 158 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 EML1O00423 815 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 VIL1P09327 827 aaKnown RBP17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 SPATA31C1P0DKV0 1188 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 SREBF1P36956 1147 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 DGKZQ13574 1117 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 HYIQ5T013 277 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms