RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CHST3Q7LGC8 479 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 MAFAQ8NHW3 353 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 FOXD4L4Q8WXT5 416 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 MYLIPQ8WY64 445 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 IWS1Q96ST2 819 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
COL5A1-202ENST00000371820 ARVCFO00192 962 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-202ENST00000371820 CFBP00751 764 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 SMPD1P17405 629 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 LIFRP42702 1097 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 ANTXR2P58335 489 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 STXBP2Q15833 593 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 MFSD5Q6N075 450 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 SYNE3Q6ZMZ3 975 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 HOMER1Q86YM7 354 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 FAM126BQ8IXS8 530 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 NEK1Q96PY6 1258 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL5A1-202ENST00000371820 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-202ENST00000371820 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
COL5A1-202ENST00000371820 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
COL5A1-202ENST00000371820 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 KPNA6O60684 536 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 FOSL2P15408 326 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 DNAJB2P25686 324 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 BEX3Q00994 111 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 GHRHRQ02643 423 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 PPIGQ13427 754 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 UBE2Q2Q8WVN8 375 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
COL5A1-202ENST00000371820 PIGSQ96S52 555 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
COL5A1-202ENST00000371820 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-202ENST00000371820 GCOM1H8Y6P7 765 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-202ENST00000371820 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-202ENST00000371820 CD4P01730 458 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 POLR2MP0CAP2 368 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 HSD17B4P51659 736 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 ME3Q16798 604 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 C16orf59Q7L2K0 433 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 SLC43A3Q8NBI5 491 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 PIBF1Q8WXW3 757 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 ZNF396Q96N95 335 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-202ENST00000371820 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
COL5A1-202ENST00000371820 CYTH3O43739 400 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
COL5A1-202ENST00000371820 ADCY5O95622 1261 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
COL5A1-202ENST00000371820 CSF2RAP15509 400 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 PTGS1P23219 599 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 ITGA7Q13683 1181 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 GRIN2CQ14957 1233 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 TMEM240Q5SV17 173 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 PSRC1Q6PGN9 363 aaPredicted RBP11.8□□□□□ -0.52
COL5A1-202ENST00000371820 KCNV1Q6PIU1 500 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 SGMS1Q86VZ5 419 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 TMEM199Q8N511 208 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 CUL5Q93034 780 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 TIFAQ96CG3 184 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 SPATA32Q96LK8 384 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
COL5A1-202ENST00000371820 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 COL20A1Q9P218 1284 aa11.8□□□□□ -0.52
COL5A1-202ENST00000371820 VCANP13611 3396 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 PRUNE2Q8WUY3 3088 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 H3BQV1 296 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 FIBPO43427 364 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 NEMFO60524 1076 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms