RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
DKC1-201ENST00000369550 AHDC1Q5TGY3 1603 aaPredicted RBP18.59■□□□□ 0.57
DKC1-201ENST00000369550 OPLAHO14841 1288 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 BIRC3Q13489 604 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 SLC9C1Q4G0N8 1177 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 PDXDC1Q6P996 788 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 PIGBQ92521 554 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 BAP1Q92560 729 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 TAF4BQ92750 862 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 CUEDC2Q9H467 287 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 PCDHA4Q9UN74 947 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 SSU72P8A0A1W2PR75 194 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 CCDC189A1A4V9 331 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 PPP2R2AP63151 447 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 SATB1Q01826 763 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 ZNF844Q08AG5 666 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 NAA25Q14CX7 972 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 ASTE1Q2TB18 679 aaPredicted RBP18.59■□□□□ 0.57
DKC1-201ENST00000369550 LRCH2Q5VUJ6 765 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 MAGEC3Q8TD91 643 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 ISCUQ9H1K1 167 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 MAGEF1Q9HAY2 307 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
DKC1-201ENST00000369550 ERVK-9P63128 1117 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 ARMC9Q7Z3E5 817 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 USP38Q8NB14 1042 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 KIAA0895Q8NCT3 520 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.58■□□□□ 0.57
DKC1-201ENST00000369550 HVCN1Q96D96 273 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 TBC1D31Q96DN5 1066 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.57
DKC1-201ENST00000369550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.58■□□□□ 0.57
DKC1-201ENST00000369550 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.57
DKC1-201ENST00000369550 NOVA2Q9UNW9 492 aaKnown RBP18.58■□□□□ 0.57
DKC1-201ENST00000369550 ITGB4P16144 1822 aa18.58■□□□□ 0.56
DKC1-201ENST00000369550 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
DKC1-201ENST00000369550 AMPD3Q01432 767 aa18.58■□□□□ 0.56
DKC1-201ENST00000369550 FAM47AQ5JRC9 791 aa18.58■□□□□ 0.56
DKC1-201ENST00000369550 RAPGEF5Q92565 580 aa18.58■□□□□ 0.56
DKC1-201ENST00000369550 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
DKC1-201ENST00000369550 PHF20L1A8MW92 1017 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 KLRC1P26715 233 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 CUL1Q13616 776 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 MEI1Q5TIA1 1274 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 DDX42Q86XP3 938 aaKnown RBP eCLIP18.57■□□□□ 0.56
DKC1-201ENST00000369550 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 KIRREL3Q8IZU9 778 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
DKC1-201ENST00000369550 KCNK3O14649 394 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 XRCC4Q13426 336 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 NAB2Q15742 525 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 ENOX2Q16206 610 aaKnown RBP18.57■□□□□ 0.56
DKC1-201ENST00000369550 UAP1Q16222 522 aaPredicted RBP18.57■□□□□ 0.56
DKC1-201ENST00000369550 HGSNATQ68CP4 663 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 C7orf25Q9BPX7 421 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 BAIAP2L1Q9UHR4 511 aa18.57■□□□□ 0.56
DKC1-201ENST00000369550 COL16A1Q07092 1604 aaPredicted RBP18.57■□□□□ 0.56
DKC1-201ENST00000369550 FGFR1OPO95684 399 aaKnown RBP18.56■□□□□ 0.56
DKC1-201ENST00000369550 KIF5BP33176 963 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 ARID5AQ03989 594 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 SFMBT2Q5VUG0 894 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 CENPPQ6IPU0 288 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 FAXDC2Q96IV6 333 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 SLC24A3Q9HC58 644 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 H0YGN5 161 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 MAGOHP61326 146 aaKnown RBP18.56■□□□□ 0.56
DKC1-201ENST00000369550 PPP1R7Q15435 360 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 NBPF9Q3BBW0 867 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 TATDN2Q93075 761 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 MAGOHBQ96A72 148 aaKnown RBP18.56■□□□□ 0.56
DKC1-201ENST00000369550 RSRC1Q96IZ7 334 aaKnown RBP18.56■□□□□ 0.56
DKC1-201ENST00000369550 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
DKC1-201ENST00000369550 NFS1Q9Y697 457 aa18.56■□□□□ 0.56
DKC1-201ENST00000369550 STARD3NLO95772 234 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 DYNLL1P63167 89 aaKnown RBP18.55■□□□□ 0.56
DKC1-201ENST00000369550 HIBCHQ6NVY1 386 aaPredicted RBP18.55■□□□□ 0.56
DKC1-201ENST00000369550 STAG2Q8N3U4 1231 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 TBC1D5Q92609 795 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 P3H4Q92791 437 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 FBXL5Q9UKA1 691 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 USP17L21D6R901 530 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 RBAK-RBAKDNI3L0D1 243 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 LAD1O00515 517 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 BUB1BO60566 1050 aaPredicted RBP18.55■□□□□ 0.56
DKC1-201ENST00000369550 SERPING1P05155 500 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 ECHS1P30084 290 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 LACTB2Q53H82 288 aaPredicted RBP18.55■□□□□ 0.56
DKC1-201ENST00000369550 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
DKC1-201ENST00000369550 SWAP70Q9UH65 585 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 PCDHA6Q9UN73 950 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 PCDHGC5Q9Y5F6 944 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 PCDHA8Q9Y5H6 950 aa18.55■□□□□ 0.56
DKC1-201ENST00000369550 FLT1P17948 1338 aa18.54■□□□□ 0.56
DKC1-201ENST00000369550 PPP1R12AO14974 1030 aaPredicted RBP18.54■□□□□ 0.56
DKC1-201ENST00000369550 MGRN1O60291 552 aa18.54■□□□□ 0.56
DKC1-201ENST00000369550 RPS6KA1Q15418 735 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms