RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PSMD1Q99460 953 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 ARHGEF10LQ9HCE6 1279 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 KCNMB3Q9NPA1 279 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 IRAK4Q9NWZ3 460 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 UBR1Q8IWV7 1749 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 KIF4AO95239 1232 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 ZSCAN29Q8IWY8 852 aaPredicted RBP20.59■□□□□ 0.89
PRDM1-202ENST00000369091 KCNV2Q8TDN2 545 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
PRDM1-202ENST00000369091 GRID2IPA4D2P6 1211 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 FCER1AP12319 257 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 FUT2Q10981 343 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 MAP3K12Q12852 859 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ASTE1Q2TB18 679 aaPredicted RBP20.58■□□□□ 0.89
PRDM1-202ENST00000369091 METTL24Q5JXM2 366 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 LRRC34Q8IZ02 419 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 KIF2BQ8N4N8 673 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 CCHCR1Q8TD31 782 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ZNF317Q96PQ6 595 aaPredicted RBP20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ELAC2Q9BQ52 826 aaKnown RBP20.58■□□□□ 0.89
PRDM1-202ENST00000369091 GOLPH3Q9H4A6 298 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 GSG1L2A8MUP6 293 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 MPHOSPH10O00566 681 aaKnown RBP20.58■□□□□ 0.89
PRDM1-202ENST00000369091 RHOBTB3O94955 611 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
PRDM1-202ENST00000369091 CHN1P15882 459 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 CCNE1P24864 410 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 KLRC1P26715 233 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 RPS6KA3P51812 740 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ALX1Q15699 326 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ARMC3Q5W041 872 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 ANKS4BQ8N8V4 417 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 SELENOSQ9BQE4 189 aa20.58■□□□□ 0.89
PRDM1-202ENST00000369091 GSTA1P08263 222 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 NQO1P15559 274 aaKnown RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 STK4Q13043 487 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 BLMHQ13867 455 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 MEI1Q5TIA1 1274 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 PYM1Q9BRP8 204 aaKnown RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 MMEP08473 750 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 PHKA1P46020 1223 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 ZNF268Q14587 947 aaPredicted RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 BAP1Q92560 729 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 DHTKD1Q96HY7 919 aaPredicted RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 SWAP70Q9UH65 585 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 AKAP11Q9UKA4 1901 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 TNKSO95271 1327 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 ABCC12Q96J65 1359 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 DAPK3O43293 454 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 VEGFAP15692 232 aaPredicted RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 TRPM8Q7Z2W7 1104 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 RNF10Q8N5U6 811 aaKnown RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 PACSIN1Q9BY11 444 aa20.57■□□□□ 0.88
PRDM1-202ENST00000369091 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
PRDM1-202ENST00000369091 RIC1Q4ADV7 1423 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 IGF2BP3O00425 579 aaKnown RBP eCLIP20.56■□□□□ 0.88
PRDM1-202ENST00000369091 KCNK3O14649 394 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 MAP3K13O43283 966 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 SART1O43290 800 aaKnown RBP20.56■□□□□ 0.88
PRDM1-202ENST00000369091 CAND2O75155 1236 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 UBOX5O94941 541 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 ALADP13716 330 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 NCALDP61601 193 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 CHD4Q14839 1912 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 STAG2Q8N3U4 1231 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 DDX47Q9H0S4 455 aaKnown RBP20.56■□□□□ 0.88
PRDM1-202ENST00000369091 STK38LQ9Y2H1 464 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 CFAP73A6NFT4 308 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 EVI5O60447 810 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 CUL1Q13616 776 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 GNPTABQ3T906 1256 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 HGSNATQ68CP4 663 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 FAM114A1Q8IWE2 563 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 CNKSR1Q969H4 720 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 OSBPL1AQ9BXW6 950 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 NLRC4Q9NPP4 1024 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 TMEM59LQ9UK28 342 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 SH3BP1Q9Y3L3 701 aa20.56■□□□□ 0.88
PRDM1-202ENST00000369091 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 F8VZ95 297 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 PRPF3O43395 683 aaKnown RBP20.55■□□□□ 0.88
PRDM1-202ENST00000369091 PDE4DQ08499 809 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
PRDM1-202ENST00000369091 VWA3BQ502W6 1294 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 ANKRD20A2Q5SQ80 823 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 ANKRD20A1Q5TYW2 823 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 ANKRD20A3Q5VUR7 823 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 PDXDC1Q6P996 788 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 TMC3Q7Z5M5 1100 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 KCNH5Q8NCM2 988 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 LMTK3Q96Q04 1460 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 AFF2P51816 1311 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 RARAP10276 462 aa20.55■□□□□ 0.88
PRDM1-202ENST00000369091 DHX9Q08211 1270 aaKnown RBP20.55■□□□□ 0.88
PRDM1-202ENST00000369091 ECT2Q9H8V3 914 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms