RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 SOX10P56693 466 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 SEMA3FQ13275 785 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 RNF180Q86T96 592 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 TLK2Q86UE8 772 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 KLHDC9Q8NEP7 349 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 SENP7Q9BQF6 1050 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 AP5M1Q9H0R1 490 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 FRMPD3Q5JV73 1810 aa27.66■■■□□ 2.02
ALKAL1-201ENST00000358543 DYNC1LI2O43237 492 aaPredicted RBP27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 PGK1P00558 417 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 GH1P01241 217 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 CST5P28325 142 aaPredicted RBP27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 MTMR1Q13613 665 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 LRRC41Q15345 812 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 LARP1BQ659C4 914 aaKnown RBP27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 MOXD1Q6UVY6 613 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 PIK3AP1Q6ZUJ8 805 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 CYP2W1Q8TAV3 490 aa27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 EMID1Q96A84 441 aaPredicted RBP27.65■■■□□ 2.02
ALKAL1-201ENST00000358543 CYP3A7-CYP3A51PA0A087WV96 503 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 FAM86B1E9PN63 330 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 DNM1LO00429 736 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 FAM86B2P0C5J1 330 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 PDCP20941 246 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 CYP3A7P24462 503 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 SP2Q02086 613 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 NEDD9Q14511 834 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 INF2Q27J81 1249 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 GJC2Q5T442 439 aaPredicted RBP27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 GIMAP8Q8ND71 665 aaPredicted RBP27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 KCNH7Q9NS40 1196 aa27.64■■■□□ 2.02
ALKAL1-201ENST00000358543 IGLV3-22A0A075B6J6 115 aa27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 CTAGE5O15320 804 aa27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 UBA1P22314 1058 aaKnown RBP27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 MNX1P50219 401 aaPredicted RBP27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 LAMC2Q13753 1193 aa27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 EARS2Q5JPH6 523 aaKnown RBP27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 OR6J1Q8NGC5 347 aa27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 COPS5Q92905 334 aa27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 TSEN34Q9BSV6 310 aaKnown RBP27.63■■■□□ 2.01
ALKAL1-201ENST00000358543 H3BQV1 296 aa27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 C6orf222P0C671 652 aaPredicted RBP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 U2AF2P26368 475 aaKnown RBP eCLIP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 SETQ01105 290 aaPredicted RBP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 ARHGAP1Q07960 439 aa27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 CELF3Q5SZQ8 465 aaKnown RBP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 IFFO2Q5TF58 517 aa27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 MYSM1Q5VVJ2 828 aa27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 CCSAPQ6IQ19 270 aaPredicted RBP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 NEK8Q86SG6 692 aa27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 NAP1L4Q99733 375 aaKnown RBP27.62■■■□□ 2.01
ALKAL1-201ENST00000358543 PTGS1P23219 599 aa27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 FSCN1Q16658 493 aaKnown RBP27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 UBE2Q1Q7Z7E8 422 aa27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 PLA2G4DQ86XP0 818 aa27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 DHX37Q8IY37 1157 aaKnown RBP27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 PCSK9Q8NBP7 692 aaKnown RBP27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 MBOAT7Q96N66 472 aa27.61■■■□□ 2.01
ALKAL1-201ENST00000358543 MYADML2A6NDP7 307 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 A6NJR5 290 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 KBTBD13C9JR72 458 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 ATP9AO75110 1047 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 GGPS1O95749 300 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 HSP90AA1P07900 732 aaKnown RBP27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 ARP10275 920 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 KCNA2P16389 499 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 CPT1AP50416 773 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 Q4G0T1 1027 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 GNASQ5JWF2 1037 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 PPP4R3AQ6IN85 833 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 NOSTRINQ8IVI9 506 aa27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 AGO4Q9HCK5 861 aaKnown RBP27.6■■■□□ 2.01
ALKAL1-201ENST00000358543 ZEB2O60315 1214 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 FARP2O94887 1054 aaPredicted RBP27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 GCFC2P16383 781 aaKnown RBP27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 GNL2Q13823 731 aaKnown RBP27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 BECN1Q14457 450 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 PRR16Q569H4 304 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 BRDTQ58F21 947 aaPredicted RBP27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 METTL7BQ6UX53 244 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 LENG9Q96B70 501 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 MLXIPQ9HAP2 919 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 FOXD4L1Q9NU39 408 aa27.59■■■□□ 2.01
ALKAL1-201ENST00000358543 FAM205CA6NFA0 338 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 MOXD2PA6NHM9 499 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 COL6A1P12109 1028 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 IRX5P78411 483 aaPredicted RBP27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 KCNA10Q16322 511 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 LETM2Q2VYF4 491 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 PPTC7Q8NI37 304 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 PHF24Q9UPV7 400 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 NFASCO94856 1347 aa27.58■■■□□ 2.01
ALKAL1-201ENST00000358543 KIF28PB7ZC32 967 aa27.57■■■□□ 2
ALKAL1-201ENST00000358543 MYCNP04198 464 aaPredicted RBP27.57■■■□□ 2
ALKAL1-201ENST00000358543 BEX3Q00994 111 aa27.57■■■□□ 2
ALKAL1-201ENST00000358543 CYFIP1Q7L576 1253 aa27.57■■■□□ 2
ALKAL1-201ENST00000358543 NECAB2Q7Z6G3 386 aa27.57■■■□□ 2
ALKAL1-201ENST00000358543 AFG1LQ8WV93 481 aa27.57■■■□□ 2
ALKAL1-201ENST00000358543 PAWRQ96IZ0 340 aaKnown RBP27.57■■■□□ 2
ALKAL1-201ENST00000358543 KPNA6O60684 536 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms