RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 PCDHA8Q9Y5H6 950 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 SZT2Q5T011 3432 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 PRPF3O43395 683 aaKnown RBP23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 B4GALT4O60513 344 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 SLC34A2O95436 690 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 SCG2P13521 617 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 ANAPC15P60006 121 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 CCT2P78371 535 aaKnown RBP23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 SPATA33Q96N06 139 aa23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 NCOA5Q9HCD5 579 aaKnown RBP23.2■■□□□ 1.3
HCFC1R1-202ENST00000354679 SMCO2A6NFE2 343 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 SPATA31C2B4DYI2 1134 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 SOX1O00570 391 aaPredicted RBP23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 FIBPO43427 364 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 FPGSQ05932 587 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 SEMA3FQ13275 785 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 NTRK3Q16288 839 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 FAM47CQ5HY64 1035 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 NFRKBQ6P4R8 1299 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 NLRX1Q86UT6 975 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 PHKBQ93100 1093 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 PPP1R12CQ9BZL4 782 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 GLT8D2Q9H1C3 349 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 EHMT1Q9H9B1 1298 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 MLXIPQ9HAP2 919 aa23.19■■□□□ 1.3
HCFC1R1-202ENST00000354679 MYH7BA7E2Y1 1941 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 IFNAR1P17181 557 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 CHMP4BP1P59074 171 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 AKAP17AQ02040 695 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 PKN1Q16512 942 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 HSDL1Q3SXM5 330 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 LRIT3Q3SXY7 679 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 MFSD5Q6N075 450 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 PPP1R13LQ8WUF5 828 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 KAT2BQ92831 832 aa23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 LARP6Q9BRS8 491 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 TRMT13Q9NUP7 481 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-202ENST00000354679 PPFIA3O75145 1194 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 SUPT20HL2P0C7V6 817 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 HOXD8P13378 290 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 PTPN11Q06124 597 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 NEDD9Q14511 834 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 SLC26A6Q9BXS9 759 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 RNF26Q9BY78 433 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 HIPK3Q9H422 1215 aa23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 LAMA2P24043 3122 aaKnown RBP23.17■■□□□ 1.3
HCFC1R1-202ENST00000354679 PPFIA4O75335 1185 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 FOSP01100 380 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 ZNF286BP0CG31 522 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 EPHB4P54760 987 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 SHHQ15465 462 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 CCDC12Q8WUD4 166 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 GPRASP2Q96D09 838 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 PGBD1Q96JS3 809 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 ANO3Q9BYT9 981 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 BCAS3Q9H6U6 928 aa23.16■■□□□ 1.3
HCFC1R1-202ENST00000354679 F2P00734 622 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 ITGB5P18084 799 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 CYP2C18P33260 490 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 PSEN2P49810 448 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 AP3B2Q13367 1082 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 METTL7BQ6UX53 244 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 CYFIP1Q7L576 1253 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 TMEM199Q8N511 208 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 LRCH3Q96II8 777 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 CDHR1Q96JP9 859 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 SENP7Q9BQF6 1050 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 NOC4LQ9BVI4 516 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 KATNAL1Q9BW62 490 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 TMEM260Q9NX78 707 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 UBIAD1Q9Y5Z9 338 aa23.15■■□□□ 1.3
HCFC1R1-202ENST00000354679 UMODL1Q5DID0 1318 aa23.14■■□□□ 1.3
HCFC1R1-202ENST00000354679 ESYT2A0FGR8 921 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 NOP56O00567 594 aaKnown RBP23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 CPLX1O14810 134 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 SEC24BO95487 1268 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 CYP2C9P11712 490 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 CLK2P49760 499 aaKnown RBP23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 STK3Q13188 491 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 ZMYND12Q9H0C1 365 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 C6orf50Q9HD87 102 aa23.14■■□□□ 1.29
HCFC1R1-202ENST00000354679 CSF2RAP15509 400 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 MFSD10Q14728 455 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 KIAA0753Q2KHM9 967 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 SESTD1Q86VW0 696 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 TRIM22Q8IYM9 498 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 ALG1Q9BT22 464 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 JADE2Q9NQC1 790 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 NOD1Q9Y239 953 aa23.13■■□□□ 1.29
HCFC1R1-202ENST00000354679 HAS3O00219 553 aa23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 SSRP1Q08945 709 aaKnown RBP23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 MTMR1Q13613 665 aa23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 JAKMIP3Q5VZ66 844 aa23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 C7orf31Q8N865 590 aa23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 GIMAP8Q8ND71 665 aaPredicted RBP23.12■■□□□ 1.29
HCFC1R1-202ENST00000354679 CCDC148Q8NFR7 591 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms